RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RAB34Q9BZG1 259 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 DISC1Q9NRI5 854 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 PCDHA10Q9Y5I2 948 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 EMSYQ7Z589 1322 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 KAT6AQ92794 2004 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 POTEMA6NI47 508 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 TRAK2O60296 914 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 ATG7O95352 703 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 PSAPP07602 524 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 SUPT20HL2P0C7V6 817 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 FXR2P51116 673 aaKnown RBP eCLIP23.24■■□□□ 1.31
RTCA-201ENST00000260563 ACLYP53396 1101 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 UTP14CQ5TAP6 766 aaKnown RBP23.24■■□□□ 1.31
RTCA-201ENST00000260563 ABHD15Q6UXT9 468 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 MRPS27Q92552 414 aaKnown RBP23.24■■□□□ 1.31
RTCA-201ENST00000260563 CSRNP2Q9H175 543 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 PHF24Q9UPV7 400 aa23.24■■□□□ 1.31
RTCA-201ENST00000260563 BACH1O14867 736 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 EN2P19622 333 aaPredicted RBP23.23■■□□□ 1.31
RTCA-201ENST00000260563 CMA1P23946 247 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 SOX10P56693 466 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 SHC4Q6S5L8 630 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 CXCL17Q6UXB2 119 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 MTG1Q9BT17 334 aaPredicted RBP23.23■■□□□ 1.31
RTCA-201ENST00000260563 AZI2Q9H6S1 392 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 ZNF215Q9UL58 517 aaPredicted RBP23.23■■□□□ 1.31
RTCA-201ENST00000260563 CABYRO75952 493 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 LONP1P36776 959 aaKnown RBP23.23■■□□□ 1.31
RTCA-201ENST00000260563 MNX1P50219 401 aaPredicted RBP23.23■■□□□ 1.31
RTCA-201ENST00000260563 KLHL40Q2TBA0 621 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 FAM160B1Q5W0V3 765 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 RESP18Q5W5W9 173 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 TRIM50Q86XT4 487 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 CCDC60Q8IWA6 550 aaPredicted RBP23.23■■□□□ 1.31
RTCA-201ENST00000260563 FSIP1Q8NA03 581 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 GLT1D1Q96MS3 346 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 KATNAL1Q9BW62 490 aa23.23■■□□□ 1.31
RTCA-201ENST00000260563 LOXHD1Q8IVV2 1947 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 A0A1W2PQ45 241 aaPredicted RBP23.22■■□□□ 1.31
RTCA-201ENST00000260563 A0A1W2PQY0 241 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 EML1O00423 815 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 LGR5O75473 907 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 F2P00734 622 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 SPECC1Q5M775 1068 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 DIS3LQ8TF46 1054 aaKnown RBP23.22■■□□□ 1.31
RTCA-201ENST00000260563 GLG1Q92896 1179 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 C16orf70Q9BSU1 422 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 ZNF302Q9NR11 478 aa23.22■■□□□ 1.31
RTCA-201ENST00000260563 ARID2Q68CP9 1835 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 IGSF9BQ9UPX0 1349 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 IGKV6D-21A0A0A0MT36 114 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 IGSF22Q8N9C0 903 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 GOLPH3LQ9H4A5 285 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 SMARCAD1Q9H4L7 1026 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 STARD7Q9NQZ5 370 aa23.21■■□□□ 1.31
RTCA-201ENST00000260563 A0A1B0GVL5 298 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 LIG1P18858 919 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 STAT5BP51692 787 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 EPHA7Q15375 998 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 SWSAP1Q6NVH7 229 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 CCDC73Q6ZRK6 1079 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 ERMNQ8TAM6 284 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 AFAP1L1Q8TED9 768 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 PCYT2Q99447 389 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 ERAP1Q9NZ08 941 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 GABBR1Q9UBS5 961 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 LRWD1Q9UFC0 647 aa23.2■■□□□ 1.3
RTCA-201ENST00000260563 H3BRB1 525 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 PDIA5Q14554 519 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 HAUS3Q68CZ6 603 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 BANK1Q8NDB2 785 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 NEK9Q8TD19 979 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 KAT2BQ92831 832 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 VTI1AQ96AJ9 217 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 PAWRQ96IZ0 340 aaKnown RBP23.19■■□□□ 1.3
RTCA-201ENST00000260563 AK8Q96MA6 479 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 SENP6Q9GZR1 1112 aaPredicted RBP23.19■■□□□ 1.3
RTCA-201ENST00000260563 TUT1Q9H6E5 874 aaKnown RBP23.19■■□□□ 1.3
RTCA-201ENST00000260563 C11orf49Q9H6J7 331 aa23.19■■□□□ 1.3
RTCA-201ENST00000260563 FAM237AA0A1B0GTK4 181 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 PFKFB1P16118 471 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 PSEN2P49810 448 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 CHMP4BP1P59074 171 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 MFSD10Q14728 455 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 PDXDC2PQ6P474 469 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 PLPPR4Q7Z2D5 763 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 NECAB2Q7Z6G3 386 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 SYMPKQ92797 1274 aaKnown RBP23.18■■□□□ 1.3
RTCA-201ENST00000260563 ATP6V0A1Q93050 837 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 EIF2AK1Q9BQI3 630 aaKnown RBP23.18■■□□□ 1.3
RTCA-201ENST00000260563 HPSEQ9Y251 543 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 STK24Q9Y6E0 443 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 P4HBP07237 508 aaKnown RBP23.18■■□□□ 1.3
RTCA-201ENST00000260563 COL6A1P12109 1028 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 MARK3P27448 753 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 SLC26A2P50443 739 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 NDUFA8P51970 172 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 PSMC6P62333 389 aa23.18■■□□□ 1.3
RTCA-201ENST00000260563 FAM160A1Q05DH4 1040 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms