RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 BAG5Q9UL15 447 aa11.02□□□□□ -0.64
TRPM1-201ENST00000256552 PACSIN2Q9UNF0 486 aaPredicted RBP11.02□□□□□ -0.64
TRPM1-201ENST00000256552 NEURL1BA8MQ27 555 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 STK10O94804 968 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 LMNB1P20700 586 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 PTPREP23469 700 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 USP4Q13107 963 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 C1orf146Q5VVC0 180 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 MAML1Q92585 1016 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 ARL8AQ96BM9 186 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 CEP19Q96LK0 163 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 FGFR1OP2Q9NVK5 253 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 HAUS5O94927 633 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 AP2B1P63010 937 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 C10orf76Q5T2E6 689 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 TAB3Q8N5C8 712 aaPredicted RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 DTX3LQ8TDB6 740 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 LRGUKQ96M69 825 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 NT5C3AQ9H0P0 336 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 ANKFY1Q9P2R3 1169 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 UHRF1BP1LA0JNW5 1464 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 RBM47A0AV96 593 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 PSMD14O00487 310 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 GSTA1P08263 222 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 OR52Z1P0C646 297 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 GHRP10912 638 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 FXR1P51114 621 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 NR1I3Q14994 352 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 C11orf91Q3C1V1 193 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 NXNQ6DKJ4 435 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 SRRM1Q8IYB3 904 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 MS4A14Q96JA4 679 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 FAM161BQ96MY7 647 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 GPR101Q96P66 508 aaPredicted RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 FAM192AQ9GZU8 254 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 CUEDC2Q9H467 287 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 EPS15L1Q9UBC2 864 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 R3HDM2Q9Y2K5 976 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.65
TRPM1-201ENST00000256552 EDC4Q6P2E9 1401 aaKnown RBP11.02□□□□□ -0.65
TRPM1-201ENST00000256552 MYBL1P10243 752 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 HSPA6P17066 643 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 GRIK3Q13003 919 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 SLF2Q8IX21 1173 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 IFNL3Q8IZI9 196 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 KAT2BQ92831 832 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 EFHD1Q9BUP0 239 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 PRDM15P57071 1507 aaPredicted RBP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 LRRC53A6NM62 1247 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 HOXC9P31274 260 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 LRRC41Q15345 812 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 RGS9BPQ6ZS82 235 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 ANKRD23Q86SG2 305 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 RDH13Q8NBN7 331 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 MAGEF1Q9HAY2 307 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 RAB21Q9UL25 225 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 COPG1Q9Y678 874 aaKnown RBP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 UBTFL6P0CB48 400 aaPredicted RBP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 BRAFP15056 766 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 ACADSP16219 412 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 MAN1A1P33908 653 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 GSTO1P78417 241 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 KPNB1Q14974 876 aaKnown RBP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 EPM2AIP1Q7L775 607 aaPredicted RBP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 DPH6Q7L8W6 267 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 GPBP1Q86WP2 473 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 PLBD2Q8NHP8 589 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 RSAD2Q8WXG1 361 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 DMAP1Q9NPF5 467 aaPredicted RBP11.01□□□□□ -0.65
TRPM1-201ENST00000256552 PNMA2Q9UL42 364 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 TMCO1Q9UM00 188 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 TRAF3IP3Q9Y228 551 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 DAPK3O43293 454 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 SCG2P13521 617 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 ARPC4P59998 168 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 FAM26FQ5R3K3 315 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 FAXDC2Q96IV6 333 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 CCDC138Q96M89 665 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 TRIM55Q9BYV6 548 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 NRDE2Q9H7Z3 1164 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 RASA4BC9J798 803 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 E7ENQ6 273 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 RASA4O43374 803 aa11.01□□□□□ -0.65
TRPM1-201ENST00000256552 CARSP49589 748 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms