RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 H0YIN7 160 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 CTDSPL2Q05D32 466 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 CKAP4Q07065 602 aaKnown RBP3.96□□□□□ -1.77
RTTN-201ENST00000255674 ITKQ08881 620 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 STRN3Q13033 797 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 USP41Q3LFD5 358 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 MAMDC4Q6UXC1 1216 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 PALM2Q8IXS6 379 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 RAET1EQ8TD07 263 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 CCDC12Q8WUD4 166 aaPredicted RBP3.96□□□□□ -1.77
RTTN-201ENST00000255674 DACT3Q96B18 629 aaPredicted RBP3.96□□□□□ -1.77
RTTN-201ENST00000255674 PNMA5Q96PV4 448 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 PCDHA6Q9UN73 950 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 SYNRGQ9UMZ2 1314 aa3.96□□□□□ -1.77
RTTN-201ENST00000255674 DNAJC25-GNG10A0A024R161 153 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 TSPY2A6NKD2 308 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 BIN1O00499 593 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CALM1P0DP23 149 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CALM2P0DP24 149 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CALM3P0DP25 149 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 EPB41P11171 864 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 FAM117BQ6P1L5 589 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 RUFY3Q7L099 469 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 RAB11FIP4Q86YS3 637 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.96□□□□□ -1.78
RTTN-201ENST00000255674 DDX12PQ92771 950 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 IFT43Q96FT9 208 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 IMPG2Q9BZV3 1241 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ANO10Q9NW15 660 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CLIP2Q9UDT6 1046 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ZKSCAN5Q9Y2L8 839 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CD2APQ9Y5K6 639 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 POLRMTO00411 1230 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 ZNF213O14771 459 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 SMARCA5O60264 1052 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 OPA1O60313 960 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 HSF2BPO75031 334 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CDC25AP30304 524 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 NDUFV1P49821 464 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 SCNN1DP51172 638 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 IFIT5Q13325 482 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 ITPK1Q13572 414 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 COL9A3Q14050 684 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 RRS1Q15050 365 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 TTF1Q15361 905 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 PAPD7Q5XG87 772 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 GAS2L3Q86XJ1 694 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 FAM114A1Q8IWE2 563 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 RUSC1Q9BVN2 902 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 BOLA2Q9H3K6 86 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ZSWIM4Q9H7M6 989 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ATP6V0A2Q9Y487 856 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 PRR19A6NJB7 356 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 SMIM23A6NLE4 172 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 WDR46O15213 610 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 NRG1Q02297 640 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 PRKCQQ04759 706 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 TRIM65Q6PJ69 517 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 TRIM59Q8IWR1 403 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 SELENOSQ9BQE4 189 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 GRPEL1Q9HAV7 217 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 EXOC1Q9NV70 894 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CWC25Q9NXE8 425 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 FEZ2Q9UHY8 353 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 SNX14Q9Y5W7 946 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 PHLPP2Q6ZVD8 1323 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 RSPH10B2B2RC85 870 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 N4BP1O75113 896 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 RSPH10BP0C881 870 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 SLC8A3P57103 927 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CCT2P78371 535 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 IRX5P78411 483 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 TRAF1Q13077 416 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 NAA25Q14CX7 972 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 POTEEQ6S8J3 1075 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 NIM1KQ8IY84 436 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 NSRP1Q9H0G5 558 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 CYLDQ9NQC7 956 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 HSFX1Q9UBD0 423 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 RPLP2P05387 115 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 CCDC172P0C7W6 258 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CLNS1AP54105 237 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 PPP1R21Q6ZMI0 780 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 USP37Q86T82 979 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ELMOD1Q8N336 334 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 DNAJC19Q96DA6 116 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 APOL6Q9BWW8 343 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 FAM117AQ9C073 453 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 ZC3H12CQ9C0D7 883 aaKnown RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 RNF41Q9H4P4 317 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 TTC12Q9H892 705 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 RASAL2Q9UJF2 1139 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 USP21Q9UK80 565 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 CLCA2Q9UQC9 943 aa3.96□□□□□ -1.78
RTTN-201ENST00000255674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.96□□□□□ -1.78
RTTN-201ENST00000255674 FAM95CA0A1B0GW59 222 aa3.95□□□□□ -1.78
RTTN-201ENST00000255674 KIF2AO00139 706 aaPredicted RBP3.95□□□□□ -1.78
RTTN-201ENST00000255674 MEIS1O00470 390 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms