RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ATP6V1C1P21283 382 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 STIP1P31948 543 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 HDAC4P56524 1084 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 INF2Q27J81 1249 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 PUS10Q3MIT2 529 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 CFAP58Q5T655 872 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 IRGCQ6NXR0 463 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 OTUD6AQ7L8S5 288 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 DZIP1Q86YF9 867 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 NME8Q8N427 588 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 ANKS4BQ8N8V4 417 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 WHAMMQ8TF30 809 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 RILPL2Q969X0 211 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 LRP2BPQ9P2M1 347 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 A0A1B0GVG6 124 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 KRT9P35527 623 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 NEK2P51955 445 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 MECOMQ03112 1051 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 ANO7Q6IWH7 933 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 ZNF384Q8TF68 577 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 ATP6V1G3Q96LB4 118 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 LLPHQ9BRT6 129 aaKnown RBP12.92□□□□□ -0.34
CCNA1-201ENST00000255465 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 FANCLQ9NW38 375 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 QPCTLQ9NXS2 382 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 TUBE1Q9UJT0 475 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 CROTQ9UKG9 612 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
CCNA1-201ENST00000255465 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 ZNF131P52739 623 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 OXCT1P55809 520 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 OLFML1Q6UWY5 402 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 LRIG3Q6UXM1 1119 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 GET4Q7L5D6 327 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 AZIN2Q96A70 460 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 ARL8AQ96BM9 186 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 CTTNBP2NLQ9P2B4 639 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 CDK5RAP2Q96SN8 1893 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 CCDC162PA2VCL2 907 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 SP100P23497 879 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 CASP14P31944 242 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 GBP1P32455 592 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 CST9Q5W186 159 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 MLKLQ8NB16 471 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 SH3TC2Q8TF17 1288 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 TCHPQ9BT92 498 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 BOLA2Q9H3K6 86 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
CCNA1-201ENST00000255465 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCNA1-201ENST00000255465 GAKO14976 1311 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 TMEM88BA6NKF7 163 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 TBC1D12O60347 775 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
CCNA1-201ENST00000255465 STAT6P42226 847 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 HTRA3P83110 453 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
CCNA1-201ENST00000255465 ATP11AP98196 1134 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 PAK2Q13177 524 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 CEP128Q6ZU80 1094 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 IQCKQ8N0W5 287 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 CENPTQ96BT3 561 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 ECHDC1Q9NTX5 307 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 PDP2Q9P2J9 529 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 SAR1BQ9Y6B6 198 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 COMMD3-BMI1R4GMX3 469 aa12.9□□□□□ -0.34
CCNA1-201ENST00000255465 H3BQV1 296 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 WNT7AO00755 349 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 SLC27A2O14975 620 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 PFDN1O60925 122 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CELF2O95319 508 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 NQO1P15559 274 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 POLE2P56282 527 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 GSTO1P78417 241 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 GUCY1A3Q02108 690 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 BIRC3Q13489 604 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 GALNT17Q6IS24 598 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 ZNF554Q86TJ5 538 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms