RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 COBLL1Q53SF7 1204 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 FAM26FQ5R3K3 315 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 RINT1Q6NUQ1 792 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 NLRX1Q86UT6 975 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 IRF2BP1Q8IU81 584 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 GPRASP2Q96D09 838 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 PFASO15067 1338 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 USP27XA6NNY8 438 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 KCNJ18B7U540 433 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 TEX33O43247 280 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 CCNE2O96020 404 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 CCZ1BP86790 482 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 CCZ1P86791 482 aaPredicted RBP20.98■□□□□ 0.95
TRIM47-201ENST00000254816 KCNJ12Q14500 433 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 PCDHA2Q9Y5H9 948 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 A0A1B0GTH6 734 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 NR1I3Q14994 352 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 KRT31Q15323 416 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 VSTM4Q8IW00 320 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 C2orf69Q8N8R5 385 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 MS4A4AQ96JQ5 239 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 NACC1Q96RE7 527 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 GTPBP4Q9BZE4 634 aaKnown RBP20.98■□□□□ 0.95
TRIM47-201ENST00000254816 TELO2Q9Y4R8 837 aa20.98■□□□□ 0.95
TRIM47-201ENST00000254816 FRMD3A2A2Y4 597 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 SOWAHBA6NEL2 793 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 ALDH5A1P51649 535 aaPredicted RBP20.97■□□□□ 0.95
TRIM47-201ENST00000254816 TCP11X2Q5H9J9 407 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 TRMT1LQ7Z2T5 733 aaKnown RBP20.97■□□□□ 0.95
TRIM47-201ENST00000254816 GUF1Q8N442 669 aaKnown RBP20.97■□□□□ 0.95
TRIM47-201ENST00000254816 CSGALNACT2Q8N6G5 542 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 DNERQ8NFT8 737 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 BICDL2A1A5D9 508 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 POTEB2H3BUK9 544 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 PGK2P07205 417 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 P4HBP07237 508 aaKnown RBP20.97■□□□□ 0.95
TRIM47-201ENST00000254816 KCNA2P16389 499 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 GTF2F1P35269 517 aaKnown RBP eCLIP20.97■□□□□ 0.951e-5■□□□□ 8.9
TRIM47-201ENST00000254816 PPP1R2P41236 205 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 UGCGQ16739 394 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 WDR78Q5VTH9 848 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 CENPPQ6IPU0 288 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 VPS16Q9H269 839 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 TAB2Q9NYJ8 693 aa20.97■□□□□ 0.95
TRIM47-201ENST00000254816 ADD3Q9UEY8 706 aaKnown RBP20.97■□□□□ 0.95
TRIM47-201ENST00000254816 CCL15-CCL14A0A0B4J2E2 113 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 LRRC37A2A6NM11 1700 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 SFI1A8K8P3 1242 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 MUTP22033 750 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 CCL15Q16663 113 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 SFR1Q86XK3 245 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 MAF1Q9H063 256 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 IMPACTQ9P2X3 320 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 LIMA1Q9UHB6 759 aaKnown RBP20.96■□□□□ 0.95
TRIM47-201ENST00000254816 MCM3APO60318 1980 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 TRPM7Q96QT4 1865 aa20.96■□□□□ 0.95
TRIM47-201ENST00000254816 UNCXA6NJT0 531 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 BTBD19C9JJ37 291 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 TNNT1P13805 278 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 FKBP1BP68106 108 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 SP4Q02446 784 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 STXBP2Q15833 593 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 CST9Q5W186 159 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 C1orf186Q6ZWK4 172 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 MYOCDQ8IZQ8 938 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 KCTD17Q8N5Z5 321 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 NEK9Q8TD19 979 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 IWS1Q96ST2 819 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 TCEAL9Q9UHQ7 104 aa20.95■□□□□ 0.95
TRIM47-201ENST00000254816 PDHXO00330 501 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 SLC25A27O95847 323 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 CASP5P51878 434 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 GOLGA8FQ08AF8 430 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 GOLGA8DPQ0D2H9 430 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 NELFCDQ8IXH7 590 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 BRI3BPQ8WY22 251 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 SH2D3AQ9BRG2 576 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 ZSWIM4Q9H7M6 989 aa20.95■□□□□ 0.94
TRIM47-201ENST00000254816 TMEM150BA6NC51 233 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 MAFGO15525 162 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 CETPP11597 493 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 QARSP47897 775 aaKnown RBP20.94■□□□□ 0.94
TRIM47-201ENST00000254816 GTF2A2P52657 109 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 COPB1P53618 953 aaKnown RBP20.94■□□□□ 0.94
TRIM47-201ENST00000254816 ERVK-9P63128 1117 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 ERVK-24P63145 666 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 KRT76Q01546 638 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 ARMCX5Q6P1M9 558 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 SEPT14Q6ZU15 432 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 CTAGE1Q96RT6 745 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 THAP9Q9H5L6 903 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 WDR64B1ANS9 1081 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 SPATA31C2B4DYI2 1134 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 SP2Q02086 613 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 SPAG1Q07617 926 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 FAM133AQ8N9E0 248 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 SMCR8Q8TEV9 937 aaPredicted RBP20.94■□□□□ 0.94
TRIM47-201ENST00000254816 PDCL3Q9H2J4 239 aa20.94■□□□□ 0.94
TRIM47-201ENST00000254816 TBCAO75347 108 aaKnown RBP20.93■□□□□ 0.94
TRIM47-201ENST00000254816 STAM2O75886 525 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms