RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 NLRP4Q96MN2 994 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 MED15Q96RN5 788 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 GCFC2P16383 781 aaKnown RBP12.89□□□□□ -0.35
LIN28A-201ENST00000254231 SP2Q02086 613 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 CST9Q5W186 159 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 YY1P25490 414 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 TRAF1Q13077 416 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 GNPTABQ3T906 1256 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 BTNL9Q6UXG8 535 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 SAAL1Q96ER3 474 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 TPM2P07951 284 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 DLATP10515 647 aaKnown RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ADAM9Q13443 819 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 RAPGEF1Q13905 1077 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 LENG9Q96B70 501 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 TIGD1Q96MW7 591 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ZNF286BP0CG31 522 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ADORA2AP29274 412 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ADCYAP1R1P41586 468 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 POLGP54098 1239 aaPredicted RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 MTMR8Q96EF0 704 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 PLEKHA4Q9H4M7 779 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
LIN28A-201ENST00000254231 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
LIN28A-201ENST00000254231 OFD1O75665 1012 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CCNE2O96020 404 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
LIN28A-201ENST00000254231 SPATA31C1P0DKV0 1188 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CYP11B2P19099 503 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 NR2F2P24468 414 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CASP14P31944 242 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CASP4P49662 377 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 PPATQ06203 517 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 MTF1Q14872 753 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 NCAPHQ15003 741 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CACNA2D4Q7Z3S7 1137 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 ETNPPLQ8TBG4 499 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 TUBE1Q9UJT0 475 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 TMCO5BA8MYB1 307 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 NRDCO43847 1150 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 HIP1RO75146 1068 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
LIN28A-201ENST00000254231 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 ERVK-24P63145 666 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 KRT31Q15323 416 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 GPRC5AQ8NFJ5 357 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 CNOT6LQ96LI5 555 aaKnown RBP12.87□□□□□ -0.35
LIN28A-201ENST00000254231 AK8Q96MA6 479 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 PSMB7Q99436 277 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
LIN28A-201ENST00000254231 JPH1Q9HDC5 661 aaPredicted RBP12.87□□□□□ -0.35
LIN28A-201ENST00000254231 PITPNM2Q9BZ72 1349 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 USP27XA6NNY8 438 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 LAD1O00515 517 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 EXOC3O60645 756 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 TSG101Q99816 390 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 MYH8P13535 1937 aa12.87□□□□□ -0.35
LIN28A-201ENST00000254231 SPDYE5A6NIY4 337 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 TPM1P09493 284 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 FGFR4P22455 802 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 BEX3Q00994 111 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 FASTKD5Q7L8L6 764 aaKnown RBP12.86□□□□□ -0.35
LIN28A-201ENST00000254231 CCDC60Q8IWA6 550 aaPredicted RBP12.86□□□□□ -0.35
LIN28A-201ENST00000254231 IGLV3-22A0A075B6J6 115 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 TNPO2O14787 897 aaKnown RBP12.86□□□□□ -0.35
LIN28A-201ENST00000254231 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
LIN28A-201ENST00000254231 ACTR2P61160 394 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 SYCP1Q15431 976 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 PTPN18Q99952 460 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 TUBGCP2Q9BSJ2 902 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 ARHGAP39Q9C0H5 1083 aa12.86□□□□□ -0.35
LIN28A-201ENST00000254231 SLC9A2Q9UBY0 812 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms