RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TMX3Q96JJ7 454 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 DDX25Q9UHL0 483 aaKnown RBP20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 NRCAMQ92823 1304 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 SLC37A4O43826 429 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 GAS7O60861 476 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 GNAT1P11488 350 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 THPOP40225 353 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 ADAM17P78536 824 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 KRT76Q01546 638 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 RBL2Q08999 1139 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 PLCB4Q15147 1175 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 SWSAP1Q6NVH7 229 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 MOXD1Q6UVY6 613 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 LRRC8DQ7L1W4 858 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 CCDC60Q8IWA6 550 aaPredicted RBP20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 RPUSD2Q8IZ73 545 aaKnown RBP20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 C8orf76Q96K31 380 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 RIT2Q99578 217 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 TCEAL9Q9UHQ7 104 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 TRPC6Q9Y210 931 aa20.33■□□□□ 0.85
SNRPA1-201ENST00000254193 CHMP2AO43633 222 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 FGBP02675 491 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 INSRRP14616 1297 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 IGBP1P78318 339 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 GRIK4Q16099 956 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 ZNF618Q5T7W0 954 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 LRCH2Q5VUJ6 765 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 FAM160B1Q5W0V3 765 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 OTOP2Q7RTS6 562 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 IL27Q8NEV9 243 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 ETNPPLQ8TBG4 499 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 ZNF302Q9NR11 478 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 PCDHA10Q9Y5I2 948 aa20.32■□□□□ 0.84
SNRPA1-201ENST00000254193 CCNT1O60563 726 aaKnown RBP20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 PSMD10O75832 226 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 RFC2P35250 354 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 GPNMBQ14956 572 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 MARCH8Q5T0T0 291 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 PPP4R3AQ6IN85 833 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 PDXDC2PQ6P474 469 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 TRAF7Q6Q0C0 670 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 SMAP1Q8IYB5 467 aaPredicted RBP20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 TEKT3Q9BXF9 490 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 UNC45AQ9H3U1 944 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 SAMM50Q9Y512 469 aa20.31■□□□□ 0.84
SNRPA1-201ENST00000254193 MYH7BA7E2Y1 1941 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 POTEB3A0JP26 581 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 WDR64B1ANS9 1081 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 PSAPP07602 524 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 GCFC2P16383 781 aaKnown RBP20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 MCM2P49736 904 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 SAFBQ15424 915 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 RASIP1Q5U651 963 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 POTEBQ6S5H4 581 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 RUFY4Q6ZNE9 571 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 TRAPPC12Q8WVT3 735 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 HERVK_113Q902F9 699 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 ZBTB10Q96DT7 871 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 FTOQ9C0B1 505 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 DISC1Q9NRI5 854 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 CXXC1Q9P0U4 656 aaPredicted RBP20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 GABBR1Q9UBS5 961 aa20.3■□□□□ 0.84
SNRPA1-201ENST00000254193 NBNO60934 754 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 PFKMP08237 780 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 ATP4AP20648 1035 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 SLC26A2P50443 739 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 MBTPS1Q14703 1052 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 TRMT1LQ7Z2T5 733 aaKnown RBP20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 ATP8B4Q8TF62 1192 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 KCNMB3Q9NPA1 279 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 TUBE1Q9UJT0 475 aa20.29■□□□□ 0.84
SNRPA1-201ENST00000254193 MBLAC1A4D2B0 266 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 RRN3P2A6NIE6 340 aa20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 RSPH10B2B2RC85 870 aa20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 CTSHP09668 335 aa20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 RSPH10BP0C881 870 aa20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 FAM109BQ6ICB4 259 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 CKAP2LQ8IYA6 745 aa20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 NAP1L4Q99733 375 aaKnown RBP20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 MAFBQ9Y5Q3 323 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 DOCK5Q9H7D0 1870 aa20.28■□□□□ 0.84
SNRPA1-201ENST00000254193 WNT7AO00755 349 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 JAK3P52333 1124 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 B3GNT9Q6UX72 402 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 MIER3Q7Z3K6 550 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 HAS1Q92839 578 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 TNPO1Q92973 898 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 FAM20AQ96MK3 541 aa20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 MTIF3Q9H2K0 278 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-201ENST00000254193 ZBBXA8MT70 800 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 GRXCR1A8MXD5 290 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 MARCH6O60337 910 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 HBP1O60381 514 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 PARNO95453 639 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 ATP2B1P20020 1258 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms