RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 PRKCZQ05513 592 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 ITGB3BPQ13352 177 aaPredicted RBP18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 SPECC1LQ69YQ0 1117 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 KLHL10Q6JEL2 608 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 DNAJC5GQ8N7S2 189 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 INPP4AQ96PE3 977 aaPredicted RBP18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 AGO4Q9HCK5 861 aaKnown RBP18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 KIAA1217Q5T5P2 1943 aa18.89■□□□□ 0.62
CDKN1A-201ENST00000244741 STX17P56962 302 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 SP4Q02446 784 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 ORC2Q13416 577 aaPredicted RBP18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 NR1I3Q14994 352 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 E2F4Q16254 413 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 PRAMEF19Q5SWL8 479 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 LRCH2Q5VUJ6 765 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 SMYD4Q8IYR2 804 aaPredicted RBP18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 ZNF296Q8WUU4 475 aaPredicted RBP18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 GSDMAQ96QA5 445 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 PLIN2Q99541 437 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 TELO2Q9Y4R8 837 aa18.89■□□□□ 0.61
CDKN1A-201ENST00000244741 MGAMO43451 1857 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 PPP1R3GB7ZBB8 358 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 PRPHP41219 470 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 FLT3LGP49771 235 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 SP2Q02086 613 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 KIF22Q14807 665 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 SPATA1Q5VX52 437 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 REXO1L1PQ8IX06 675 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 TC2NQ8N9U0 490 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 USP6NLQ92738 828 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 CFHR5Q9BXR6 569 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 V9GYY5 206 aaPredicted RBP18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 THSD7BQ9C0I4 1608 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 ASB14A6NK59 587 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 GAS7O60861 476 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 CYP2C19P33261 490 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 NCAPH2Q6IBW4 605 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 XRRA1Q6P2D8 792 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 APTXQ7Z2E3 356 aaKnown RBP18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 NLRX1Q86UT6 975 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 SLFN12Q8IYM2 578 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 L2HGDHQ9H9P8 463 aa18.88■□□□□ 0.61
CDKN1A-201ENST00000244741 A0A1B0GTH6 734 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 CCP110O43303 1012 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 SLU7O95391 586 aaKnown RBP18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 RGS2P41220 211 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 ADKP55263 362 aaKnown RBP18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 ETF1P62495 437 aaKnown RBP18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 LY6KQ17RY6 165 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 TMEM266Q2M3C6 531 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 IQUBQ8NA54 791 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 SLC5A5Q92911 643 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 ERO1AQ96HE7 468 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 TINF2Q9BSI4 451 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 BLZF1Q9H2G9 400 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 LRWD1Q9UFC0 647 aa18.87■□□□□ 0.61
CDKN1A-201ENST00000244741 ARHGAP6O43182 974 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 ARIH2O95376 493 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 TUBB4AP04350 444 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 GNPTABQ3T906 1256 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 PDXDC2PQ6P474 469 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 TRIM65Q6PJ69 517 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 GPRASP2Q96D09 838 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 FAM20AQ96MK3 541 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 MTRQ99707 1265 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 SLC5A4Q9NY91 659 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 EML1O00423 815 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 DHX15O43143 795 aaKnown RBP18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 TEX33O43247 280 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 PSMD10O75832 226 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 GJC2Q5T442 439 aaPredicted RBP18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 IGSF22Q8N9C0 903 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
CDKN1A-201ENST00000244741 B4DLN1 442 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 TBX3O15119 743 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 LONP1P36776 959 aaKnown RBP18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 KARSQ15046 597 aaKnown RBP18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 OTOP1Q7RTM1 612 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 NIPA1Q7RTP0 329 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 UNC45AQ9H3U1 944 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 ZHX1Q9UKY1 873 aaPredicted RBP18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 KCNA2P16389 499 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 CBX1P83916 185 aa18.85■□□□□ 0.61
CDKN1A-201ENST00000244741 CDKAL1Q5VV42 579 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms