RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 CYP26C1Q6V0L0 522 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 NIPA1Q7RTP0 329 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 ZNF710Q8N1W2 664 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 OR8K1Q8NGG5 319 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 SYTL5Q8TDW5 730 aaPredicted RBP17.69■□□□□ 0.42
ITGA4-201ENST00000233573 OTUD5Q96G74 571 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 RIT2Q99578 217 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 UNC45AQ9H3U1 944 aa17.69■□□□□ 0.42
ITGA4-201ENST00000233573 LUC7L2Q9Y383 392 aaKnown RBP17.69■□□□□ 0.42
ITGA4-201ENST00000233573 CASP5P51878 434 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 WDR59Q6PJI9 974 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 NDST4Q9H3R1 872 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 DNAI1Q9UI46 699 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 SIK3Q9Y2K2 1263 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 RIPK3Q9Y572 518 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-201ENST00000233573 IPO5O00410 1097 aaKnown RBP17.68■□□□□ 0.42
ITGA4-201ENST00000233573 TRAF5O00463 557 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 ZBED4O75132 1171 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 FDX1P10109 184 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 MEA1Q16626 185 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 PCNX4Q63HM2 1172 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 MAP1SQ66K74 1059 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-201ENST00000233573 RINT1Q6NUQ1 792 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 REPS2Q8NFH8 660 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 CEP63Q96MT8 703 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 AGPAT5Q9NUQ2 364 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 WRAP73Q9P2S5 460 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-201ENST00000233573 PNMA2Q9UL42 364 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 UBIAD1Q9Y5Z9 338 aa17.68■□□□□ 0.42
ITGA4-201ENST00000233573 A0A0U1RQJ8 604 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 A0A1W2PQJ5 194 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 IRF6O14896 467 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 DHX15O43143 795 aaKnown RBP17.67■□□□□ 0.42
ITGA4-201ENST00000233573 CHMP2AO43633 222 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 KIF20AO95235 890 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 DSG3P32926 999 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 NF2P35240 595 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 HOXD13P35453 343 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
ITGA4-201ENST00000233573 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
ITGA4-201ENST00000233573 EPHA7Q15375 998 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 CATSPERGQ6ZRH7 1159 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 ATRIPQ8WXE1 791 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 CHP1Q99653 195 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 TEKT3Q9BXF9 490 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 KCNH7Q9NS40 1196 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 LOXHD1Q8IVV2 1947 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 PEX10O60683 326 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 EDRF1Q3B7T1 1238 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 SH3D19Q5HYK7 790 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 FKBP15Q5T1M5 1219 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 TPH2Q8IWU9 490 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 PIGOQ8TEQ8 1089 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 WDR24Q96S15 920 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 COL4A3BPQ9Y5P4 624 aa17.67■□□□□ 0.42
ITGA4-201ENST00000233573 ZBTB39O15060 712 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 RPS6P62753 249 aaKnown RBP17.66■□□□□ 0.42
ITGA4-201ENST00000233573 COG2Q14746 738 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 BMT2Q1RMZ1 405 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 ANKRD13AQ8IZ07 590 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 IQCDQ96DY2 449 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 TRERF1Q96PN7 1200 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 TAAR1Q96RJ0 339 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 BCAS3Q9H6U6 928 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 TRAF3IP3Q9Y228 551 aa17.66■□□□□ 0.42
ITGA4-201ENST00000233573 SPDYE16A6NNV3 312 aaPredicted RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 TRIM21P19474 475 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ZBED6P86452 979 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 RBM10P98175 930 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 TMEM132BQ14DG7 1078 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 TKFCQ3LXA3 575 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 SNRNP48Q6IEG0 339 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 PNMA8AQ86V59 439 aaPredicted RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ACRBPQ8NEB7 543 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 RBM46Q8TBY0 533 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ANKRD7Q92527 254 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 PURBQ96QR8 312 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ZHX3Q9H4I2 956 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ZNF408Q9H9D4 720 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 JADE2Q9NQC1 790 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 OLFML3Q9NRN5 406 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ZNF215Q9UL58 517 aaPredicted RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 ZNF214Q9UL59 606 aaPredicted RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 NCBP1Q09161 790 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 PGM5Q15124 567 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 GADL1Q6ZQY3 521 aa17.65■□□□□ 0.42
ITGA4-201ENST00000233573 AGO4Q9HCK5 861 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 REXO2Q9Y3B8 237 aaKnown RBP17.65■□□□□ 0.42
ITGA4-201ENST00000233573 LOC285556D6RIA3 1793 aa17.64■□□□□ 0.41
ITGA4-201ENST00000233573 EPHB6O15197 1021 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms