RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 RAB6BQ9NRW1 208 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 LRWD1Q9UFC0 647 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 POLR2AP24928 1970 aaKnown RBP10.96□□□□□ -0.65
TTC1-201ENST00000231238 SCN4AP35499 1836 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 CXCL11O14625 94 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 SLC37A4O43826 429 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 STAU1O95793 577 aaKnown RBP10.95□□□□□ -0.66
TTC1-201ENST00000231238 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
TTC1-201ENST00000231238 SLFN14P0C7P3 912 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
TTC1-201ENST00000231238 SREBF1P36956 1147 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 AFMP43652 599 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 USP4Q13107 963 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 CLN3Q13286 438 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.662e-14■■■□□ 15.7
TTC1-201ENST00000231238 PNOCQ13519 176 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 POSTNQ15063 836 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 KRT79Q5XKE5 535 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 SNRNP48Q6IEG0 339 aaKnown RBP10.95□□□□□ -0.66
TTC1-201ENST00000231238 MOXD1Q6UVY6 613 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 CATSPERGQ6ZRH7 1159 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 CLMNQ96JQ2 1002 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 DNAJC25Q9H1X3 360 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 TTC12Q9H892 705 aaPredicted RBP10.95□□□□□ -0.66
TTC1-201ENST00000231238 RNF146Q9NTX7 359 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 PCDHA12Q9UN75 941 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 RABGAP1Q9Y3P9 1069 aa10.95□□□□□ -0.66
TTC1-201ENST00000231238 A6NJR5 290 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 TRAF5O00463 557 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 CDC25AP30304 524 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 ZNF165P49910 485 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 OAZ1P54368 228 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 TPM4P67936 248 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 PPIL2Q13356 520 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 KARSQ15046 597 aaKnown RBP10.94□□□□□ -0.66
TTC1-201ENST00000231238 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 FASTKD5Q7L8L6 764 aaKnown RBP10.94□□□□□ -0.66
TTC1-201ENST00000231238 C2orf69Q8N8R5 385 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 ERMNQ8TAM6 284 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 CCDC47Q96A33 483 aaKnown RBP10.94□□□□□ -0.66
TTC1-201ENST00000231238 PLIN2Q99541 437 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 TEX13BQ9BXU2 312 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 MYPNQ86TC9 1320 aa10.94□□□□□ -0.66
TTC1-201ENST00000231238 PP2D1A8MPX8 630 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 NFIBO00712 420 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 OPLAHO14841 1288 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 GNRH1P01148 92 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 IL2RAP01589 272 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 UBXN2AP68543 259 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 IL17AQ16552 155 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 UVSSAQ2YD98 709 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 ISM2Q6H9L7 571 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 RNF207Q6ZRF8 634 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 ELOA2Q8IYF1 753 aaPredicted RBP10.93□□□□□ -0.66
TTC1-201ENST00000231238 SAMD3Q8N6K7 520 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 SNX29Q8TEQ0 813 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 TBC1D5Q92609 795 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 UIMC1Q96RL1 719 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 FUCA2Q9BTY2 467 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 CCSER1Q9C0I3 900 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 DISC1Q9NRI5 854 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 ZNF536O15090 1300 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 CYP3A7-CYP3A51PA0A087WV96 503 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 SLC35F4A4IF30 521 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 CYP3A7P24462 503 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 STAT3P40763 770 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 NLRP12P59046 1061 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 SNAPC2Q13487 334 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 PDIA5Q14554 519 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 TKFCQ3LXA3 575 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 MUM1L1Q5H9M0 696 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 TREML2Q5T2D2 321 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 ARHGEF16Q5VV41 709 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 PLA2G4DQ86XP0 818 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 GRAMD1CQ8IYS0 662 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 MB21D1Q8N884 522 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 MTMR9Q96QG7 549 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 UCN2Q96RP3 112 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 PAGR1Q9BTK6 254 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 CUEDC2Q9H467 287 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 ACAD9Q9H845 621 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 GBA2Q9HCG7 927 aaPredicted RBP10.93□□□□□ -0.66
TTC1-201ENST00000231238 MAP3K20Q9NYL2 800 aaKnown RBP10.93□□□□□ -0.66
TTC1-201ENST00000231238 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
TTC1-201ENST00000231238 A0A0G2JLL6 359 aaPredicted RBP10.92□□□□□ -0.66
TTC1-201ENST00000231238 TBX3O15119 743 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 CELF2O95319 508 aaKnown RBP10.92□□□□□ -0.66
TTC1-201ENST00000231238 CYP3A4P08684 503 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 SKIP12755 728 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 GPC1P35052 558 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 CCT6AP40227 531 aaKnown RBP10.92□□□□□ -0.66
TTC1-201ENST00000231238 HSD17B4P51659 736 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 FKBP1BP68106 108 aa10.92□□□□□ -0.66
TTC1-201ENST00000231238 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms