RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CCDC84Q86UT8 332 aaPredicted RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 NELFCDQ8IXH7 590 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 TCP11Q8WWU5 503 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 RSRC1Q96IZ7 334 aaKnown RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 G3BP2Q9UN86 482 aaKnown RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 HYOU1Q9Y4L1 999 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 CDK5RAP2Q96SN8 1893 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 TRAF5O00463 557 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 OPLAHO14841 1288 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 OPA1O60313 960 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PPP1R11O60927 126 aaPredicted RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 GLI1P08151 1106 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 CLTAP09496 248 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 GPSM2P81274 684 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 HDLBPQ00341 1268 aaKnown RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 EHHADHQ08426 723 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 TTBK2Q6IQ55 1244 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 CCDC13Q8IYE1 715 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 DNAJC19Q96DA6 116 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 CD209Q9NNX6 404 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 GPR75-ASB3A0A0A6YYF3 556 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 CAND2O75155 1236 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 FTCDO95954 541 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 LDHCP07864 332 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PRLRP16471 622 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 SLC16A2P36021 539 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PPP1R2P41236 205 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 POLR2FP61218 127 aaKnown RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PSMD2Q13200 908 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 NNTQ13423 1086 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PICALMQ13492 652 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 KRT79Q5XKE5 535 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 IQCEQ6IPM2 695 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PARD3BQ8TEW8 1205 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 HAS1Q92839 578 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 ALS2CR12Q96Q35 445 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PACSIN1Q9BY11 444 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 STIM2Q9P246 746 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 TRPM7Q96QT4 1865 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 E9PMD0 336 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM153BP0C7A2 387 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 TCP1P17987 556 aaKnown RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 CARSP49589 748 aaKnown RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 ADCY7P51828 1080 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 COASYQ13057 564 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 GRAPQ13588 217 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PPP1R7Q15435 360 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM153CQ494X1 144 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZNF572Q7Z3I7 529 aaPredicted RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZNF804AQ7Z570 1209 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 GRAPLQ8TC17 118 aaPredicted RBP10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM167BQ9BTA0 163 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM153AQ9UHL3 310 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
HLA-DOA-201ENST00000229829 PJA2O43164 708 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 AKR1B1P15121 316 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 KLRC1P26715 233 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 PTPROQ16827 1216 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 TMEM266Q2M3C6 531 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 TTMPQ5BVD1 217 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM83BQ5T0W9 1011 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 CFAP58Q5T655 872 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 SLC16A10Q8TF71 515 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAXDC2Q96IV6 333 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZNF287Q9HBT7 754 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 DDX20Q9UHI6 824 aaKnown RBP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 PALMO75781 387 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 UFL1O94874 794 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 SSR1P43307 286 aaKnown RBP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 HLTFQ14527 1009 aaKnown RBP eCLIP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZCWPW2Q504Y3 356 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 MFSD14BQ5SR56 506 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 HIBCHQ6NVY1 386 aaPredicted RBP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 C8orf74Q6P047 294 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 MYOCDQ8IZQ8 938 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 ARMC2Q8NEN0 867 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 TBC1D5Q92609 795 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 MCM8Q9UJA3 840 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 NFU1Q9UMS0 254 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 A0A087X0T9 212 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 SHOX2O60902 331 aaPredicted RBP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM228BP0C875 321 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 PAFAH1B1P43034 410 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 TMEM119Q4V9L6 283 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 NOX5Q96PH1 765 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 LSM14BQ9BX40 385 aaKnown RBP10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 JMJD4Q9H9V9 463 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 MTMR4Q9NYA4 1195 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 ADAMTS1Q9UHI8 967 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 COL4A3BPQ9Y5P4 624 aa10.3□□□□□ -0.76
HLA-DOA-201ENST00000229829 ESYT2A0FGR8 921 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 F8W031 263 aaPredicted RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 ITIH3Q06033 890 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms