RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PAXIP1Q6ZW49 1069 aaPredicted RBP18.62■□□□□ 0.57
GAPDH-201ENST00000229239 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
GAPDH-201ENST00000229239 LRRN4CLQ8ND94 238 aa18.62■□□□□ 0.57
GAPDH-201ENST00000229239 GLIS3Q8NEA6 775 aa18.62■□□□□ 0.57
GAPDH-201ENST00000229239 CDCA5Q96FF9 252 aa18.62■□□□□ 0.57
GAPDH-201ENST00000229239 EIF2AK1Q9BQI3 630 aaKnown RBP18.62■□□□□ 0.57
GAPDH-201ENST00000229239 WDR11Q9BZH6 1224 aa18.62■□□□□ 0.57
GAPDH-201ENST00000229239 NHEJ1Q9H9Q4 299 aaPredicted RBP18.62■□□□□ 0.57
GAPDH-201ENST00000229239 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
GAPDH-201ENST00000229239 TRAF3IP3Q9Y228 551 aa18.62■□□□□ 0.57
GAPDH-201ENST00000229239 PSMD10O75832 226 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 GAP43P17677 238 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 KLK7P49862 253 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 CCDC174Q6PII3 467 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 OTOP1Q7RTM1 612 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 SLC35F6Q8N357 371 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 HSD17B14Q9BPX1 270 aa18.61■□□□□ 0.57
GAPDH-201ENST00000229239 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 ATP8B1O43520 1251 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 TUBBP07437 444 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 GHRHRQ02643 423 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.571e-323■■■■□ 26.1
GAPDH-201ENST00000229239 BMT2Q1RMZ1 405 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 CEP55Q53EZ4 464 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 EPM2AIP1Q7L775 607 aaPredicted RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 SRGAP1Q7Z6B7 1085 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 C2orf69Q8N8R5 385 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 NEK11Q8NG66 645 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 SYN2Q92777 582 aaPredicted RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 GBA2Q9HCG7 927 aaPredicted RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 MAP3K20Q9NYL2 800 aaKnown RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 THSD7BQ9C0I4 1608 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 A0A0U1RQJ8 604 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 CETN3O15182 167 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 ICAM1P05362 532 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 HSPA1AP0DMV8 641 aaKnown RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 HSPA1BP0DMV9 641 aaKnown RBP18.6■□□□□ 0.57
GAPDH-201ENST00000229239 HERVK_113P62684 666 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 SPA17Q15506 151 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 LRCH2Q5VUJ6 765 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 CYP4F22Q6NT55 531 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 MIGA2Q7L4E1 593 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 TRIM59Q8IWR1 403 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 ATRIPQ8WXE1 791 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 HHIPL1Q96JK4 782 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 CCDC42Q96M95 316 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 KCND2Q9NZV8 630 aa18.6■□□□□ 0.57
GAPDH-201ENST00000229239 NPHP3-ACAD11A0A0J9YXS1 232 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 PDXKO00764 312 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 CALUO43852 315 aaPredicted RBP18.59■□□□□ 0.57
GAPDH-201ENST00000229239 TBCAO75347 108 aaKnown RBP18.59■□□□□ 0.57
GAPDH-201ENST00000229239 HSD17B4P51659 736 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 HUNKP57058 714 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 GRM1Q13255 1194 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 KNOP1Q1ED39 458 aaKnown RBP18.59■□□□□ 0.57
GAPDH-201ENST00000229239 KIAA1328Q86T90 577 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 MCF2L2Q86YR7 1114 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 NEK9Q8TD19 979 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 CAPNS2Q96L46 248 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 REEP2Q9BRK0 252 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 MMRN2Q9H8L6 949 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 OLFML3Q9NRN5 406 aa18.59■□□□□ 0.57
GAPDH-201ENST00000229239 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 MEIS1O00470 390 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 LCA5LO95447 670 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 BCRP11274 1271 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 PSMC6P62333 389 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 CCDC122Q5T0U0 273 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 NIPA1Q7RTP0 329 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 APOBEC3FQ8IUX4 373 aaKnown RBP18.58■□□□□ 0.57
GAPDH-201ENST00000229239 PRPF38AQ8NAV1 312 aaKnown RBP18.58■□□□□ 0.57
GAPDH-201ENST00000229239 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 JAKMIP2Q96AA8 810 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 RIT2Q99578 217 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 TANGO6Q9C0B7 1094 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 KIAA1683Q9H0B3 1180 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 TBC1D7Q9P0N9 293 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 CEP72Q9P209 647 aa18.58■□□□□ 0.57
GAPDH-201ENST00000229239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.58■□□□□ 0.57
GAPDH-201ENST00000229239 EML1O00423 815 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 USO1O60763 962 aaKnown RBP18.58■□□□□ 0.56
GAPDH-201ENST00000229239 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
GAPDH-201ENST00000229239 RPL13P26373 211 aaKnown RBP18.58■□□□□ 0.56
GAPDH-201ENST00000229239 VAV2P52735 878 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 ADAM9Q13443 819 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 RASA3Q14644 834 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 BMS1Q14692 1282 aaKnown RBP18.58■□□□□ 0.56
GAPDH-201ENST00000229239 PRAMEF18Q5VWM3 479 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 FRMD5Q7Z6J6 570 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 NELFCDQ8IXH7 590 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 UIMC1Q96RL1 719 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 FGFBP2Q9BYJ0 223 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 ZHX3Q9H4I2 956 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.56
GAPDH-201ENST00000229239 SEL1LQ9UBV2 794 aa18.58■□□□□ 0.56
GAPDH-201ENST00000229239 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
GAPDH-201ENST00000229239 NKRFO15226 690 aaKnown RBP eCLIP18.57■□□□□ 0.56
GAPDH-201ENST00000229239 EIF3DO15371 548 aaKnown RBP eCLIP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms