RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 LARGE2Q8N3Y3 721 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 UBLCP1Q8WVY7 318 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 M0R2N6 131 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 ECE2O60344 883 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 HOXA7P31268 230 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 C15orf52Q6ZUT6 534 aaKnown RBP16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 CYP11B2P19099 503 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 ADAT2Q7Z6V5 191 aaKnown RBP16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 EDEM3Q9BZQ6 932 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 NR3C1P04150 777 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 SP4Q02446 784 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 TBC1D10BQ4KMP7 808 aaPredicted RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 NAA35Q5VZE5 725 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 CCDC113Q9H0I3 377 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 MYH13Q9UKX3 1938 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 SSU72P8A0A1W2PR75 194 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 MED24O75448 989 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 TAL1P17542 331 aaPredicted RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 APBA1Q02410 837 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 ZFPM1Q8IX07 1006 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 CERS5Q8N5B7 392 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 REEP2Q9BRK0 252 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 PODXL2Q9NZ53 605 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 TARSL2A2RTX5 802 aaKnown RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 KRIT1O00522 736 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 TAF1P21675 1872 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 SSR1P43307 286 aaKnown RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 AOC3Q16853 763 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 CCNI2Q6ZMN8 369 aaPredicted RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 RNF10Q8N5U6 811 aaKnown RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 FAM20AQ96MK3 541 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 CHD4Q14839 1912 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 GNGT1P63211 74 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 RNF187Q5TA31 235 aaPredicted RBP16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 ZNF577Q9BSK1 485 aa16.36■□□□□ 0.21
UBE2D4-201ENST00000222402 ROBO1Q9Y6N7 1651 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 DDTLA6NHG4 134 aaPredicted RBP16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 RAD17O75943 681 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 SLC9A1P19634 815 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 WDR93Q6P2C0 686 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 CATSPER3Q86XQ3 398 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 CCDC26Q8TAB7 109 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 PARVGQ9HBI0 331 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 MRPL11Q9Y3B7 192 aaKnown RBP16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 NDUFAB1O14561 156 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 MYCLP12524 364 aaPredicted RBP16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 EZH2Q15910 746 aaKnown RBP16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 LRRC15Q8TF66 581 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 LRRN2O75325 713 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 MYBP10242 640 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 AMPD2Q01433 879 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 MIER3Q7Z3K6 550 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 EIF2AK1Q9BQI3 630 aaKnown RBP16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 CTTNBP2NLQ9P2B4 639 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 RNF14Q9UBS8 474 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 AMFRQ9UKV5 643 aa16.35■□□□□ 0.21
UBE2D4-201ENST00000222402 CCDC169A6NNP5 214 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 K7ENM7 598 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 KLRC1P26715 233 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 HAS1Q92839 578 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 CAPS2Q9BXY5 557 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 KCNQ5Q9NR82 932 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 DMGDHQ9UI17 866 aaKnown RBP16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 SIK3Q9Y2K2 1263 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 ANKRD65E5RJM6 399 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 GAP43P17677 238 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 CDK17Q00537 523 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 TAX1BP1Q86VP1 789 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 SYCE1Q8N0S2 351 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 BCAS4Q8TDM0 211 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 BICD1Q96G01 975 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 AP1M1Q9BXS5 423 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 ANKRD36CQ5JPF3 1778 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 MAP2K7O14733 419 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 TMEM119Q4V9L6 283 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 CEP85LQ5SZL2 805 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 CNKSR1Q969H4 720 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 TEKT3Q9BXF9 490 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 HPCAL4Q9UM19 191 aa16.34■□□□□ 0.21
UBE2D4-201ENST00000222402 PDE2AO00408 941 aaPredicted RBP16.33■□□□□ 0.21
UBE2D4-201ENST00000222402 ALAS1P13196 640 aa16.33■□□□□ 0.21
UBE2D4-201ENST00000222402 GOLPH3Q9H4A6 298 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms