RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TTLL12Q14166 644 aaPredicted RBP14.84□□□□□ -0.03
RAB3D-201ENST00000222120 PDXDC1Q6P996 788 aa14.84□□□□□ -0.03
RAB3D-201ENST00000222120 DPH6Q7L8W6 267 aa14.84□□□□□ -0.03
RAB3D-201ENST00000222120 HOOK2Q96ED9 719 aa14.84□□□□□ -0.03
RAB3D-201ENST00000222120 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
RAB3D-201ENST00000222120 PCDHAC2Q9Y5I4 1007 aa14.84□□□□□ -0.03
RAB3D-201ENST00000222120 HGSO14964 777 aaPredicted RBP14.83□□□□□ -0.03
RAB3D-201ENST00000222120 BCRP11274 1271 aa14.83□□□□□ -0.03
RAB3D-201ENST00000222120 SMTNP53814 917 aa14.83□□□□□ -0.03
RAB3D-201ENST00000222120 KNOP1Q1ED39 458 aaKnown RBP14.83□□□□□ -0.03
RAB3D-201ENST00000222120 PPP4R3AQ6IN85 833 aa14.83□□□□□ -0.03
RAB3D-201ENST00000222120 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.03
RAB3D-201ENST00000222120 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.03
RAB3D-201ENST00000222120 CRAMP1Q96RY5 1269 aa14.83□□□□□ -0.03
RAB3D-201ENST00000222120 MESDQ14696 234 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 CAPS2Q9BXY5 557 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 STIM2Q9P246 746 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 SNX12Q9UMY4 172 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 SCN11AQ9UI33 1791 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 ARFGEF2Q9Y6D5 1785 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 CTNNA2P26232 953 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 CETN2P41208 172 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 NT5C2P49902 561 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 PLCB3Q01970 1234 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 NIM1KQ8IY84 436 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 CCDC114Q96M63 670 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 SCLT1Q96NL6 688 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 FNBP1Q96RU3 617 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 REEP2Q9BRK0 252 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 LRRC4BQ9NT99 713 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 RASAL2Q9UJF2 1139 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 RSPH10B2B2RC85 870 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 RSPH10BP0C881 870 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 MYBP10242 640 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 PROM2Q8N271 834 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 GOLGA5Q8TBA6 731 aa14.83□□□□□ -0.04
RAB3D-201ENST00000222120 PAIP2Q9BPZ3 127 aaKnown RBP14.83□□□□□ -0.04
RAB3D-201ENST00000222120 DDTLA6NHG4 134 aaPredicted RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 RSRC2Q7L4I2 434 aaKnown RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 CCDC105Q8IYK2 499 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 EIF2AK1Q9BQI3 630 aaKnown RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 ANKZF1Q9H8Y5 726 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 USTQ9Y2C2 406 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 ANO9A1A5B4 782 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 MYZAPP0CAP1 466 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 EZH2Q15910 746 aaKnown RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 SEPT7Q16181 437 aaKnown RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 ZC2HC1CQ53FD0 456 aaPredicted RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 SEL1L2Q5TEA6 688 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 IRF2BP1Q8IU81 584 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 PNMA5Q96PV4 448 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 DNAJC7Q99615 494 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 ARHGAP20Q9P2F6 1191 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 KLRC4O43908 158 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 EPHB4P54760 987 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 RHBDL3P58872 404 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 MYL7Q01449 175 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 MAP2K1Q02750 393 aaPredicted RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 BEND6Q5SZJ8 279 aaPredicted RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 CYP2W1Q8TAV3 490 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 DCAF4Q8WV16 495 aa14.82□□□□□ -0.04
RAB3D-201ENST00000222120 MRRFQ96E11 262 aaKnown RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 UBE2TQ9NPD8 197 aaPredicted RBP14.82□□□□□ -0.04
RAB3D-201ENST00000222120 H3BQF6 201 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
RAB3D-201ENST00000222120 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
RAB3D-201ENST00000222120 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 GSTA5Q7RTV2 222 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 BLOC1S4Q9NUP1 217 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 LRRC10BA6NIK2 292 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 E7EVH7 732 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 MED24O75448 989 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 AP3B2Q13367 1082 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 ZNF746Q6NUN9 644 aaPredicted RBP14.81□□□□□ -0.04
RAB3D-201ENST00000222120 MICALCLQ6ZW33 695 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 SYCE1Q8N0S2 351 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 LRRC45Q96CN5 670 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 NACC1Q96RE7 527 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 ERGIC2Q96RQ1 377 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 DDX47Q9H0S4 455 aaKnown RBP14.81□□□□□ -0.04
RAB3D-201ENST00000222120 RIOX1Q9H6W3 641 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 ABCB11O95342 1321 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 KLRC1P26715 233 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 TM4SF1P30408 202 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 PSMC6P62333 389 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 CENPPQ6IPU0 288 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 GJB7Q6PEY0 223 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 USP37Q86T82 979 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 CATSPER3Q86XQ3 398 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 C4orf32Q8N8J7 132 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 ZNF341Q9BYN7 854 aa14.81□□□□□ -0.04
RAB3D-201ENST00000222120 PSMD14O00487 310 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 EPHB6O15197 1021 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 TNNI1P19237 187 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ARHGAP25P42331 645 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ARHGEF16Q5VV41 709 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 NLRX1Q86UT6 975 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 GLYCTKQ8IVS8 523 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms