RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 MEI1Q5TIA1 1274 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 HGSNATQ68CP4 663 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 C6orf89Q6UWU4 347 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 PNMA1Q8ND90 353 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 MYCBPAPQ8TBZ2 947 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 LRRC15Q8TF66 581 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 CALR3Q96L12 384 aaKnown RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 MMRN2Q9H8L6 949 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 TMBIM4Q9HC24 238 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 TMEM59LQ9UK28 342 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 SAMM50Q9Y512 469 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 GOLGA6L7A0A1B0GV03 622 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 BHMG1C9JSJ3 638 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 GLI1P08151 1106 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 MATR3P43243 847 aaKnown RBP eCLIP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 CARSP49589 748 aaKnown RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 RUFY4Q6ZNE9 571 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 CACNA2D4Q7Z3S7 1137 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 ZNF444Q8N0Y2 327 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 MAGEC3Q8TD91 643 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 CCT8L2Q96SF2 557 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 IDI2Q9BXS1 227 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 TAF1DQ9H5J8 278 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 PRDM16Q9HAZ2 1276 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 EPB41L5Q9HCM4 733 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 FAM207AQ9NSI2 230 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 NFU1Q9UMS0 254 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 KIF1CO43896 1103 aaKnown RBP17.47■□□□□ 0.39
SF3A2-201ENST00000221494 GNA14O95837 355 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 KRT14P02533 472 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 ANXA13P27216 316 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 GNA11P29992 359 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 CXCL9Q07325 125 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 MTMR3Q13615 1198 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 IFI16Q16666 785 aaKnown RBP17.47■□□□□ 0.39
SF3A2-201ENST00000221494 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 ZFPM1Q8IX07 1006 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
SF3A2-201ENST00000221494 PBKQ96KB5 322 aa17.47■□□□□ 0.39
SF3A2-201ENST00000221494 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
SF3A2-201ENST00000221494 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
SF3A2-201ENST00000221494 DDX60LQ5H9U9 1706 aaKnown RBP17.46■□□□□ 0.39
SF3A2-201ENST00000221494 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 EPHB6O15197 1021 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 PAEPP09466 180 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 FCER1AP12319 257 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 VEGFAP15692 232 aaPredicted RBP17.46■□□□□ 0.39
SF3A2-201ENST00000221494 CACNB3P54284 484 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 GUCY2DQ02846 1103 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 NBPF20Q3BBV1 942 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 SPDYCQ5MJ68 293 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 AGBL2Q5U5Z8 902 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 SFMBT2Q5VUG0 894 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 NEK8Q86SG6 692 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 CEP63Q96MT8 703 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 SALL4Q9UJQ4 1053 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
SF3A2-201ENST00000221494 CCDC172P0C7W6 258 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 SLC1A4P43007 532 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
SF3A2-201ENST00000221494 MARSP56192 900 aaKnown RBP17.46■□□□□ 0.39
SF3A2-201ENST00000221494 RASSF7Q02833 373 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
SF3A2-201ENST00000221494 RAB34Q9BZG1 259 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 CXorf56Q9H5V9 222 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 C6orf50Q9HD87 102 aa17.46■□□□□ 0.39
SF3A2-201ENST00000221494 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
SF3A2-201ENST00000221494 SLC26A4O43511 780 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 RASSF9O75901 435 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 CXCR5P32302 372 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 EHHADHQ08426 723 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 SLC18A3Q16572 532 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 SKIDA1Q1XH10 827 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 SH2D3CQ8N5H7 860 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 NAV1Q8NEY1 1877 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 RASGRP4Q8TDF6 673 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 CASKIN2Q8WXE0 1202 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 JDP2Q8WYK2 163 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 MMTAG2Q9BU76 263 aaKnown RBP17.45■□□□□ 0.38
SF3A2-201ENST00000221494 TDRD3Q9H7E2 651 aaKnown RBP17.45■□□□□ 0.38
SF3A2-201ENST00000221494 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
SF3A2-201ENST00000221494 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
SF3A2-201ENST00000221494 C5orf60A6NFR6 353 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
SF3A2-201ENST00000221494 NCK2O43639 380 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 MYZAPP0CAP1 466 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 RDXP35241 583 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms