RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 FAM86B1E9PN63 330 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 FAM86B2P0C5J1 330 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 INSRRP14616 1297 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 RPS6KB1P23443 525 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 SREBF1P36956 1147 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 KCNQ1P51787 676 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 ERVK-21P61565 698 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 MRPS5P82675 430 aaKnown RBP25.27■■□□□ 1.64
VTI1B-201ENST00000216456 MGAT3Q09327 533 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 SYMPKQ92797 1274 aaKnown RBP25.27■■□□□ 1.64
VTI1B-201ENST00000216456 SMARCAD1Q9H4L7 1026 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 NCOA5Q9HCD5 579 aaKnown RBP25.27■■□□□ 1.64
VTI1B-201ENST00000216456 TUBE1Q9UJT0 475 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 SIP14410 1827 aa25.27■■□□□ 1.64
VTI1B-201ENST00000216456 MEIS1O00470 390 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 MAFGO15525 162 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 CAND2O75155 1236 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 CCNE2O96020 404 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 SCG2P13521 617 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 RASGRP4Q8TDF6 673 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 ADAMTS19Q8TE59 1207 aa25.26■■□□□ 1.63
VTI1B-201ENST00000216456 TGS1Q96RS0 853 aaKnown RBP25.26■■□□□ 1.63
VTI1B-201ENST00000216456 LARP6Q9BRS8 491 aaKnown RBP25.26■■□□□ 1.63
VTI1B-201ENST00000216456 IFIH1Q9BYX4 1025 aaKnown RBP25.26■■□□□ 1.63
VTI1B-201ENST00000216456 FAM49AQ9H0Q0 323 aaPredicted RBP25.26■■□□□ 1.63
VTI1B-201ENST00000216456 MBLAC1A4D2B0 266 aaPredicted RBP25.25■■□□□ 1.63
VTI1B-201ENST00000216456 FOSP01100 380 aaPredicted RBP25.25■■□□□ 1.63
VTI1B-201ENST00000216456 HTRA4P83105 476 aaPredicted RBP25.25■■□□□ 1.63
VTI1B-201ENST00000216456 TMEM62Q0P6H9 643 aa25.25■■□□□ 1.63
VTI1B-201ENST00000216456 LPIN1Q14693 890 aa25.25■■□□□ 1.63
VTI1B-201ENST00000216456 PLCB4Q15147 1175 aa25.25■■□□□ 1.63
VTI1B-201ENST00000216456 NFASCO94856 1347 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 ZNF76P36508 570 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 RCAN1P53805 252 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 CCT2P78371 535 aaKnown RBP25.24■■□□□ 1.63
VTI1B-201ENST00000216456 NTRK3Q16288 839 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 CRYGNQ8WXF5 182 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 TOP1MTQ969P6 601 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 SDF4Q9BRK5 362 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 TRPC6Q9Y210 931 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 INSL6Q9Y581 213 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 CDY2AQ9Y6F7 541 aa25.24■■□□□ 1.63
VTI1B-201ENST00000216456 hCG_1984214I3L0E3 225 aa25.23■■□□□ 1.63
VTI1B-201ENST00000216456 AP3B2Q13367 1082 aa25.23■■□□□ 1.63
VTI1B-201ENST00000216456 TAF2Q6P1X5 1199 aa25.23■■□□□ 1.63
VTI1B-201ENST00000216456 PLA2G4DQ86XP0 818 aa25.23■■□□□ 1.63
VTI1B-201ENST00000216456 ZNF713Q8N859 430 aaPredicted RBP25.23■■□□□ 1.63
VTI1B-201ENST00000216456 AGXT2Q9BYV1 514 aa25.23■■□□□ 1.63
VTI1B-201ENST00000216456 AGO3Q9H9G7 860 aaKnown RBP25.23■■□□□ 1.63
VTI1B-201ENST00000216456 KAT6AQ92794 2004 aa25.22■■□□□ 1.63
VTI1B-201ENST00000216456 TCF20Q9UGU0 1960 aaKnown RBP25.22■■□□□ 1.63
VTI1B-201ENST00000216456 IGLV3-22A0A075B6J6 115 aa25.22■■□□□ 1.63
VTI1B-201ENST00000216456 PRPF3O43395 683 aaKnown RBP25.22■■□□□ 1.63
VTI1B-201ENST00000216456 RPAINQ86UA6 219 aa25.22■■□□□ 1.63
VTI1B-201ENST00000216456 SP7Q8TDD2 431 aaPredicted RBP25.22■■□□□ 1.63
VTI1B-201ENST00000216456 YME1L1Q96TA2 773 aa25.22■■□□□ 1.63
VTI1B-201ENST00000216456 ZMYND12Q9H0C1 365 aa25.22■■□□□ 1.63
VTI1B-201ENST00000216456 AZI2Q9H6S1 392 aa25.22■■□□□ 1.63
VTI1B-201ENST00000216456 NID2Q14112 1375 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 DHX15O43143 795 aaKnown RBP25.21■■□□□ 1.63
VTI1B-201ENST00000216456 BMP1P13497 986 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 PDIA3P30101 505 aaKnown RBP25.21■■□□□ 1.63
VTI1B-201ENST00000216456 STAT5BP51692 787 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 TOB2Q14106 344 aaPredicted RBP25.21■■□□□ 1.63
VTI1B-201ENST00000216456 FBXO47Q5MNV8 452 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 LINC01599Q8WXQ3 324 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 SLC26A6Q9BXS9 759 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 VPS54Q9P1Q0 977 aa25.21■■□□□ 1.63
VTI1B-201ENST00000216456 CCDC196A0A1B0GTZ2 297 aa25.2■■□□□ 1.62
VTI1B-201ENST00000216456 EDIL3O43854 480 aa25.2■■□□□ 1.62
VTI1B-201ENST00000216456 DTNBO60941 627 aa25.2■■□□□ 1.62
VTI1B-201ENST00000216456 ATG7O95352 703 aa25.2■■□□□ 1.62
VTI1B-201ENST00000216456 CD52P31358 61 aa25.2■■□□□ 1.62
VTI1B-201ENST00000216456 MRPS6P82932 125 aaKnown RBP25.2■■□□□ 1.62
VTI1B-201ENST00000216456 CCDC60Q8IWA6 550 aaPredicted RBP25.2■■□□□ 1.62
VTI1B-201ENST00000216456 FBXO22Q8NEZ5 403 aa25.2■■□□□ 1.62
VTI1B-201ENST00000216456 UHRF1Q96T88 793 aaPredicted RBP25.2■■□□□ 1.62
VTI1B-201ENST00000216456 TSPYL2Q9H2G4 693 aaPredicted RBP25.2■■□□□ 1.62
VTI1B-201ENST00000216456 TNFRSF10AO00220 468 aa25.19■■□□□ 1.62
VTI1B-201ENST00000216456 REC8O95072 547 aa25.19■■□□□ 1.62
VTI1B-201ENST00000216456 EPC2Q52LR7 807 aa25.19■■□□□ 1.62
VTI1B-201ENST00000216456 ABHD15Q6UXT9 468 aa25.19■■□□□ 1.62
VTI1B-201ENST00000216456 TRMT1LQ7Z2T5 733 aaKnown RBP25.19■■□□□ 1.62
VTI1B-201ENST00000216456 APBB2Q92870 758 aa25.19■■□□□ 1.62
VTI1B-201ENST00000216456 IGKV6D-21A0A0A0MT36 114 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 ESYT2A0FGR8 921 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 POTEB3A0JP26 581 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 ENPP3O14638 875 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 BACH1O14867 736 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 CYP3A4P08684 503 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 ATP4AP20648 1035 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 POTEBQ6S5H4 581 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 PLPPR4Q7Z2D5 763 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 RSPH3Q86UC2 560 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 REXO1Q8N1G1 1221 aaKnown RBP25.18■■□□□ 1.62
VTI1B-201ENST00000216456 FBXL16Q8N461 479 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 UPF3BQ9BZI7 483 aaKnown RBP25.18■■□□□ 1.62
VTI1B-201ENST00000216456 C6orf50Q9HD87 102 aa25.18■■□□□ 1.62
VTI1B-201ENST00000216456 RRN3P2A6NIE6 340 aa25.17■■□□□ 1.62
VTI1B-201ENST00000216456 PSMA5P28066 241 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms