RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 CYP11B2P19099 503 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 FECHP22830 423 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 PPP4CP60510 307 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 DHX9Q08211 1270 aaKnown RBP16.54■□□□□ 0.24
EFNB1-201ENST00000204961 DDR1Q08345 913 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 TTMPQ5BVD1 217 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 CHADLQ6NUI6 762 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 OSGEPQ9NPF4 335 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 MED4Q9NPJ6 270 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 ROBO1Q9Y6N7 1651 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 ZBTB5O15062 677 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 GYS1P13807 737 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 SHMT1P34896 483 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 HGSNATQ68CP4 663 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 TMOD1P28289 359 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 TUBB2AQ13885 445 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 ZNF571Q7Z3V5 609 aaPredicted RBP16.53■□□□□ 0.24
EFNB1-201ENST00000204961 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 DAGLBQ8NCG7 672 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 TUBB2BQ9BVA1 445 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 TSGA10Q9BZW7 698 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 XIRP1Q702N8 1843 aaKnown RBP16.53■□□□□ 0.24
EFNB1-201ENST00000204961 GH2P01242 217 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 IVLP07476 585 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 PLCG2P16885 1265 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 ECE1P42892 770 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 ADCY1Q08828 1119 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 CASKIN2Q8WXE0 1202 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 RUSC1Q9BVN2 902 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
EFNB1-201ENST00000204961 FAM86B1E9PN63 330 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 TBCAO75347 108 aaKnown RBP16.52■□□□□ 0.24
EFNB1-201ENST00000204961 AKAP3O75969 853 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 FAM86B2P0C5J1 330 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 ATP2B4P23634 1241 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 ARHGAP4P98171 946 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 EXOC3L4Q17RC7 722 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 ARSHQ5FYA8 562 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 ALKBH5Q6P6C2 394 aaKnown RBP16.52■□□□□ 0.24
EFNB1-201ENST00000204961 DNAJC17Q9NVM6 304 aaKnown RBP16.52■□□□□ 0.24
EFNB1-201ENST00000204961 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
EFNB1-201ENST00000204961 TCP1P17987 556 aaKnown RBP16.52■□□□□ 0.24
EFNB1-201ENST00000204961 SSTR3P32745 418 aaPredicted RBP16.52■□□□□ 0.24
EFNB1-201ENST00000204961 FLT3P36888 993 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 ICA1Q05084 483 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 CPXCR1Q8N123 301 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 CUEDC2Q9H467 287 aa16.52■□□□□ 0.24
EFNB1-201ENST00000204961 EML1O00423 815 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 EBAG9O00559 213 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 TRIM51Q9BSJ1 452 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.23
EFNB1-201ENST00000204961 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 GCNT4Q9P109 453 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 STK17AQ9UEE5 414 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.23
EFNB1-201ENST00000204961 DDX60Q8IY21 1712 aaKnown RBP16.52■□□□□ 0.23
EFNB1-201ENST00000204961 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 XRCC5P13010 732 aaKnown RBP16.51■□□□□ 0.23
EFNB1-201ENST00000204961 SYCP3Q8IZU3 236 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 F5H6K3 240 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 DAPK3O43293 454 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 ATMINO43313 823 aaPredicted RBP16.51■□□□□ 0.23
EFNB1-201ENST00000204961 BUB1BO60566 1050 aaPredicted RBP16.51■□□□□ 0.23
EFNB1-201ENST00000204961 KLRC3Q07444 240 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 ASPRV1Q53RT3 343 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 PEX26Q7Z412 305 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
EFNB1-201ENST00000204961 LRRC4CQ9HCJ2 640 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
EFNB1-201ENST00000204961 ANKRD36CQ5JPF3 1778 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 LOC102724159A0A0B4J2E5 919 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 GRID2IPA4D2P6 1211 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 GOLGA8IPA6NC78 632 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 GOLGA8JA6NMD2 632 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 E7EVH7 732 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 KRIT1O00522 736 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 KRT13P13646 458 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 JAG1P78504 1218 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 LRRC63Q05C16 580 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 PWP2Q15269 919 aaKnown RBP16.5■□□□□ 0.23
EFNB1-201ENST00000204961 DHX36Q9H2U1 1008 aaKnown RBP16.5■□□□□ 0.23
EFNB1-201ENST00000204961 RIC8AQ9NPQ8 531 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 PLAAQ9Y263 795 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 PVALEFA0A1B0GWK0 134 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 SLCO1A2P46721 670 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 CCDC25Q86WR0 208 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 TEKT1Q969V4 418 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 SERPING1P05155 500 aa16.5■□□□□ 0.23
EFNB1-201ENST00000204961 MCM3P25205 808 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms