RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 ADAT2Q7Z6V5 191 aaKnown RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 TAF4BQ92750 862 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 VIPAS39Q9H9C1 493 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 SEPT11Q9NVA2 429 aaKnown RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 GNGT1P63211 74 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 CTTNQ14247 550 aaKnown RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 ZNF662Q6ZS27 426 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 C15orf52Q6ZUT6 534 aaKnown RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 RASSF4Q9H2L5 321 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 NAV1Q8NEY1 1877 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 IGKV6D-41A0A0C4DH26 115 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 HSF2BPO75031 334 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 POLD1P28340 1107 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 AARSP49588 968 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDC27-201ENST00000066544 DNM3Q9UQ16 869 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 COL5A3P25940 1745 aaPredicted RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 DDX60LQ5H9U9 1706 aaKnown RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 F5H6K3 240 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 hCG_1984214I3L0E3 225 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 TULP2O00295 520 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 CFBP00751 764 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 CRKP46108 304 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 KLRC3Q07444 240 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 TPH2Q8IWU9 490 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 PROM2Q8N271 834 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 ZNF713Q8N859 430 aaPredicted RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 COA1Q9GZY4 146 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 LUC7LQ9NQ29 371 aaKnown RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 SSU72P8A0A1W2PR75 194 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 FAM86B1E9PN63 330 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 FAM86B2P0C5J1 330 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 CLK2P49760 499 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 NT5C2P49902 561 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 SLC18A3Q16572 532 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 MAATS1Q7Z4T9 603 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 MYH1P12882 1939 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 KDM3AQ9Y4C1 1321 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 AKAP3O75969 853 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 CFAP58Q5T655 872 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 ZNF571Q7Z3V5 609 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 BCAS4Q8TDM0 211 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 ZIM3Q96PE6 472 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 TRIM31Q9BZY9 425 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 KCTD10Q9H3F6 313 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 RREB1Q92766 1687 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 ABCB4P21439 1286 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 EXOC3L4Q17RC7 722 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 ZC2HC1CQ53FD0 456 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 TMX4Q9H1E5 349 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 TDRD3Q9H7E2 651 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 AJAP1Q9UKB5 411 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 AHDC1Q5TGY3 1603 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 MEIS2O14770 477 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 GFPT2O94808 682 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 XRCC5P13010 732 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 ORC2Q13416 577 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 PRPF4BQ13523 1007 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 SH2D3AQ9BRG2 576 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 RUSC1Q9BVN2 902 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 GRID2IPA4D2P6 1211 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 GH2P01242 217 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 IRAK1P51617 712 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 EPHB4P54760 987 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 GIT2Q14161 759 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 RPS6KA1Q15418 735 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 COBLL1Q53SF7 1204 aa9.09□□□□□ -0.95
CDC27-201ENST00000066544 U2AF1L4Q8WU68 220 aaKnown RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.09□□□□□ -0.95
CDC27-201ENST00000066544 WNK3Q9BYP7 1800 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 DDX39AO00148 427 aaKnown RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 POLRMTO00411 1230 aaKnown RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 EML1O00423 815 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 NDUFB10O96000 172 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 UCHL3P15374 230 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 HPDP32754 393 aaPredicted RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 CCDC174Q6PII3 467 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 FBXO11Q86XK2 927 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 IQCDQ96DY2 449 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 DDX47Q9H0S4 455 aaKnown RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 SWAP70Q9UH65 585 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 RGL2O15211 777 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 RAD51CO43502 376 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 NOVP48745 357 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 CYP2J2P51589 502 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 ERMNQ8TAM6 284 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 GJD4Q96KN9 370 aaPredicted RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 AMNQ9BXJ7 453 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 CAPS2Q9BXY5 557 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 PODXL2Q9NZ53 605 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 BCCIPQ9P287 314 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC27-201ENST00000066544 PCDHA2Q9Y5H9 948 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms