RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Extl3Q9WVL6 918 aa25.31■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Kmt2eQ3UG20 1868 aa25.31■■□□□ 1.64
Upf3a-201ENSMUST00000043767 4932429P05RikA2ADI4 785 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Spocd1B1ASB6 936 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Rasip1Q3U0S6 961 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Gm1587Q3UT80 123 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Frmd3Q8BHD4 595 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Osbpl2Q8BX94 484 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ears2Q9CXJ1 523 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Elf2Q9JHC9 593 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Chaf1aQ9QWF0 911 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Nek3Q9R0A5 511 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ranbp17Q99NF8 1088 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Adgrf4Q9D2L6 698 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Sh2b2Q9JID9 621 aa25.3■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Adssl1P28650 457 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Miga1Q4QQM5 600 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 A1cfQ5YD48 595 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Dnm3Q8BZ98 863 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Mrgprx1Q8CIP3 322 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Nek9Q8K1R7 984 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Lrp2bpQ9D4C6 346 aa25.29■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Dhtkd1A2ATU0 921 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Slc16a2O70324 545 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Actr2P61161 394 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Krt14Q61781 484 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Rbm12b2Q66JV4 834 aaKnown RBP25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Herc4Q6PAV2 1057 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Naa35Q6PHQ8 725 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Kdm1aQ6ZQ88 853 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ulbp1Q8HWA3 334 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Spdl1Q923A2 608 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Tacc2Q9JJG0 1149 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Plod3Q9R0E1 741 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ggps1Q9WTN0 300 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Idh1O88844 414 aaKnown RBP25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Serpina1aP07758 413 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Serpina1bP22599 413 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Cd68P31996 326 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Serpina1cQ00896 412 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Serpina1dQ00897 413 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Rnf157Q3TEL6 685 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Fam161bQ8CB59 589 aa25.28■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Gm11549A0A286YD83 63 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Nsun6Q7TS68 476 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Csgalnact2Q8C1F4 542 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Apol10aQ8CCA5 318 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 PdgfcQ8CI19 345 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Dnajc14Q921R4 703 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Rhobtb3Q9CTN4 611 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Uchl5Q9WUP7 329 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Sbno2Q7TNB8 1349 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Zfp984A2A7A2 547 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Trappc11B2RXC1 1133 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Abcb4P21440 1276 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Col9a2Q07643 688 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Eif3j1Q3UGC7 261 aaKnown RBP25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 P4ha1Q60715 534 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Asnsd1Q8BFS9 627 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Tdp1Q8BJ37 609 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ivns1abpQ920Q8 642 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Haus2Q9CQS9 234 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 YwhabQ9CQV8 246 aaKnown RBP25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Efhd1Q9D4J1 240 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Hic1Q9R1Y5 733 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Astn1Q61137 1302 aa25.27■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Akr1b1P45376 316 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Cep126Q0VBV7 1103 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 MaeaQ4VC33 396 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Fez2Q6TYB5 348 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Pnma1Q8C1C8 353 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Rpap3Q9D706 660 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Serpinb12Q9D7P9 423 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Nudt12Q9DCN1 462 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Twf2Q9Z0P5 349 aaKnown RBP25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Col4a3Q9QZS0 1669 aa25.26■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Wfdc16A2A5H4 111 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Got1P05201 413 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 TxnP10639 105 aaKnown RBP25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Psmc5P62196 406 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Stim1P70302 685 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tgoln2Q62314 363 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tpd52Q62393 224 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Jade2Q6ZQF7 829 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Azin2Q8BVM4 459 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Exoc1Q8R3S6 894 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Dnajc17Q91WT4 303 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Vwa5aQ99KC8 793 aaKnown RBP25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tbx20Q9ES03 445 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Gm45208A0A140LJ36 292 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tnfaip8l3Q3TBL6 204 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Lrrc14bQ3UJB3 510 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Ift88Q61371 824 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Iws1Q8C1D8 766 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tmem134Q8R0J4 195 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Mfap3Q922T2 349 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Pstpip2Q99M15 334 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 PpihQ9D868 188 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Mxra8Q9DBV4 442 aa25.25■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Lmod3E9QA62 571 aa25.24■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms