RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Tsc1Q9EP53 1161 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tubgcp6G5E8P0 1769 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Aox3G3X982 1335 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gm7995L7N2E4 160 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dhx37Q6NZL1 1150 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 PigsQ6PD26 555 aaKnown RBP10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Zfp341Q6PGC9 846 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tor4aQ8BH02 426 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 HgsQ99LI8 775 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 FibpQ9JI19 357 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mdc1Q5PSV9 1707 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Speer4f2E9Q366 295 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 L1camP11627 1260 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Serpina1bP22599 413 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 H2afxP27661 143 aaKnown RBP10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 S100a5P63084 93 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rtel1Q0VGM9 1203 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 HdxQ14B70 692 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tmem109Q3UBX0 243 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ces3aQ63880 571 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ehd2Q8BH64 543 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 LRWD1Q8BUI3 648 aaKnown RBP10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Epc1Q8C9X6 813 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 C8aQ8K182 587 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Champ1Q8K327 802 aaKnown RBP10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ces3bQ8VCU1 571 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Zkscan3Q91VW9 553 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ccdc124Q9D8X2 217 aaKnown RBP10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 CsadQ9DBE0 493 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Fbxl16A2RT62 479 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 CatspereP0DP43 985 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Vsnl1P62761 191 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Morc2bQ8C5W4 1022 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tmem134Q8R0J4 195 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ero1aQ8R180 464 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 CpzQ8R4V4 654 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rpap2Q8VC34 614 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Foxp3Q99JB6 429 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ift81O35594 676 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ppp4cP97470 307 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mier3Q3UHF3 551 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Polr2bQ8CFI7 1174 aaKnown RBP10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pde6cQ91ZQ1 861 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Spc24Q9D083 201 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Thap2Q9D305 217 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ecel1Q9JMI0 775 aa10.73□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gjb6P70689 261 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 RubcnlQ3TD16 648 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Fam81aQ3UXZ6 364 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mapk6Q61532 720 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nuak1Q641K5 658 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Fam196bQ6GQV1 535 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tsen34Q8BMZ5 316 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rcn2Q8BP92 320 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rab11fip4Q8BQP8 635 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gbp5Q8CFB4 590 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 MbipQ99LQ1 341 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mmrn2A6H6E2 943 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pfkfb3A7UAK5 555 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gm1758F6VZZ1 202 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tspyl1O88852 379 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 NsfP46460 744 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rps12P63323 132 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cnga4Q3UW12 575 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rasa3Q60790 834 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Edrf1Q6GQV7 1239 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Naa35Q6PHQ8 725 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dars2Q8BIP0 653 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Lsm14bQ8CGC4 385 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Apbb1ipQ8R5A3 670 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 GrapQ9CX99 217 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 KynuQ9CXF0 464 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Peg12Q9WVA7 283 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Art2aP17981 287 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pcif1P59114 706 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Frmd8Q3UFK8 466 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ppp2r2aQ6P1F6 447 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Usp17leQ7M764 540 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Actr5Q80US4 605 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ttc26Q8BS45 554 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pspc1Q8R326 523 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Creb3l3Q91XE9 479 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tom1l1Q923U0 474 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Phldb3E9QAF4 648 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Vmn2r78K7N6U5 853 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Idh1O88844 414 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 CtshP49935 333 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rhbdl3P58873 404 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Plekhf1Q3TB82 279 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ckap2Q3V1H1 664 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Islr2Q5RKR3 745 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 AlcamQ61490 583 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dync1li2Q6PDL0 492 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Dzip3Q7TPV2 1204 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 FktnQ8R507 461 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Slc12a8Q8VI23 705 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Q91WD4 421 aa10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Spats2lQ91WJ7 558 aaKnown RBP10.72□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Syngap1F6SEU4 1340 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Arfgef2A2A5R2 1792 aa10.71□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms