RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Anks6Q6GQX6 883 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gpr101Q80T62 511 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Kctd6Q8BNL5 237 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rasal3Q8C2K5 1041 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ccdc15Q8C9M2 810 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rnf6Q9DBU5 667 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Scgb2b11A0A087WR49 112 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 SfnO70456 248 aaKnown RBP9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Irf5P56477 497 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Zc3h18Q0P678 948 aaKnown RBP9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ppp2r5aQ6PD03 486 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Vipas39Q8BGQ1 491 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ppp1r11Q8K1L5 131 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Nxf1Q99JX7 618 aaKnown RBP9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cdca7Q9D0M2 382 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Add1Q9QYC0 735 aaKnown RBP9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 P2ry10Q8BFU7 328 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Hpcal4Q8BGZ1 191 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ulbp1Q8HWA3 334 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sdr42e1Q9D665 394 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 LbrQ3U9G9 626 aaKnown RBP9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lrig2Q52KR2 1054 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Klhl7Q8BUL5 586 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 SucoQ8C341 1250 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 StambpQ9CQ26 424 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Llcfc1Q9D9P8 108 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Arhgef7Q9ES28 862 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Map3k20Q9ESL4 802 aaKnown RBP9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Myh7Q91Z83 1935 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gpr161B2RPY5 545 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 SnrpfP62307 86 aaKnown RBP9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Q3TTJ4 293 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fam183bQ5NC57 135 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Papd7Q6PB75 542 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 SpopQ6ZWS8 374 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Usp17leQ7M764 540 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fgd5Q80UZ0 1219 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Dnajc17Q91WT4 303 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Grin3bQ91ZU9 1003 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Dpp7Q9ET22 506 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lrp5Q91VN0 1614 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Scgb2b19J3QM75 112 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Erbb2P70424 1256 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Krt31Q61765 416 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ccdc169Q8BXX9 214 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Nemp2Q8CB65 421 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 HyiQ8R1F5 277 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 PpanQ91YU8 470 aaKnown RBP9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 DohhA0A1Y7VJ29 135 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Slc2a13Q3UHK1 637 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Adamts18Q4VC17 1219 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Snx14Q8BHY8 964 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fam43aQ8BUP8 424 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Zhx2Q8C0C0 836 aaKnown RBP9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 MyripQ8K3I4 856 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Slc12a8Q8VI23 705 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ttc1Q91Z38 292 aa9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cse1lQ9ERK4 971 aaKnown RBP9.23□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cfap44E9Q5M6 1843 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sclt1G5E861 688 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Apba2P98084 750 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sec31aQ3UPL0 1230 aaKnown RBP9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mtus1Q5HZI1 1210 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Znf771Q8BJ90 317 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Bicd1Q8BR07 835 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tbx22Q8K402 517 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Acsl3Q9CZW4 720 aaKnown RBP9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cst12Q9DAN8 128 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Svs3aF2Z472 265 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Nck2O55033 380 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Prl2c3P04768 224 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lrrc4bP0C192 709 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sox13Q04891 613 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gbp8Q2V6D6 525 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cyp11b1Q3TG86 501 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Dcaf15Q6PFH3 600 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sh2b1Q91ZM2 756 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Surf6P70279 355 aaKnown RBP9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Q66JV7 365 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Serpinb3dQ6UKZ0 387 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Psmd5Q8BJY1 504 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Borcs6Q9D6W8 360 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Pus7B7ZNL8 666 aaKnown RBP9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Slurp2P0DP59 97 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Msh3P13705 1091 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Hps5P59438 1126 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Evi5P97366 809 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 NntQ61941 1086 aaKnown RBP9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Pde1cQ64338 706 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Hdac10Q6P3E7 666 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Myef2Q8C854 591 aaKnown RBP9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 C8aQ8K182 587 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 PpihQ9D868 188 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gucy1b3O54865 620 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Klhdc9Q3USL1 350 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rab11fip4Q8BQP8 635 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fam177a1Q8BR63 207 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Bhmt2Q91WS4 363 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Snapc2Q91XA5 359 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tdrd1Q99MV1 1172 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms