RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W UBP7P40453 1071 aa2.33□□□□□ -2.04
UBP15YMR304W BNA2P47125 453 aa2.33□□□□□ -2.04
UBP15YMR304W HLJ1P48353 224 aa2.33□□□□□ -2.04
UBP15YMR304W BUL1P48524 976 aa2.33□□□□□ -2.04
UBP15YMR304W STB4P50104 949 aa2.33□□□□□ -2.04
UBP15YMR304W FMS1P50264 508 aa2.33□□□□□ -2.04
UBP15YMR304W EXG2P52911 562 aa2.33□□□□□ -2.04
UBP15YMR304W YNR068CP53754 272 aa2.33□□□□□ -2.04
UBP15YMR304W VPS75P53853 264 aa2.33□□□□□ -2.04
UBP15YMR304W GET3Q12154 354 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W COQ4O13525 335 aa2.32□□□□□ -2.04
UBP15YMR304W RPS14AP06367 137 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W HEM15P16622 393 aa2.32□□□□□ -2.04
UBP15YMR304W SOF1P33750 489 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W DHR2P36009 735 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W YBR139WP38109 508 aa2.32□□□□□ -2.04
UBP15YMR304W CUE1P38428 203 aa2.32□□□□□ -2.04
UBP15YMR304W RPS14BP39516 138 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W SOP4P39543 234 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W YIL166CP40445 542 aa2.32□□□□□ -2.04
UBP15YMR304W BMT5P40493 336 aa2.32□□□□□ -2.04
UBP15YMR304W IDP2P41939 412 aa2.32□□□□□ -2.04
UBP15YMR304W YJL107CP42947 387 aa2.32□□□□□ -2.04
UBP15YMR304W IDS2P46958 469 aa2.32□□□□□ -2.04
UBP15YMR304W RPC17P47076 161 aa2.32□□□□□ -2.04
UBP15YMR304W YJR056CP47115 236 aa2.32□□□□□ -2.04
UBP15YMR304W RPS7BP48164 190 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W SOL1P50278 321 aa2.32□□□□□ -2.04
UBP15YMR304W GUP1P53154 560 aa2.32□□□□□ -2.04
UBP15YMR304W MRH4P53166 561 aa2.32□□□□□ -2.04
UBP15YMR304W UBX4P54730 416 aa2.32□□□□□ -2.04
UBP15YMR304W ELP3Q02908 557 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W RPN9Q04062 393 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W APC4Q04601 652 aa2.32□□□□□ -2.04
UBP15YMR304W GSF2Q04697 403 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W ECM38Q05902 660 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W YLR345WQ06137 509 aa2.32□□□□□ -2.04
UBP15YMR304W IZH3Q07959 543 aa2.32□□□□□ -2.04
UBP15YMR304W SUL2Q12325 893 aa2.32□□□□□ -2.04
UBP15YMR304W DCN1Q12395 269 aa2.32□□□□□ -2.04
UBP15YMR304W HRP1Q99383 534 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W ARG4P04076 463 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W RPS4AP0CX35 261 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W RPS4BP0CX36 261 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W MRP7P12687 371 aa2.32□□□□□ -2.04
UBP15YMR304W CCA1P21269 546 aa2.32□□□□□ -2.04
UBP15YMR304W PUT3P25502 979 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W YCR016WP25617 290 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W RPC19P28000 142 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W SPC97P38863 823 aa2.32□□□□□ -2.04
UBP15YMR304W CYC2P38909 366 aa2.32□□□□□ -2.04
UBP15YMR304W SSO2P39926 295 aa2.32□□□□□ -2.04
UBP15YMR304W PDS1P40316 373 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W QDR1P40475 563 aa2.32□□□□□ -2.04
UBP15YMR304W CFD1P40558 293 aa2.32□□□□□ -2.04
UBP15YMR304W IMA5P40884 581 aa2.32□□□□□ -2.04
UBP15YMR304W FKH2P41813 862 aa2.32□□□□□ -2.04
UBP15YMR304W AAD10P47182 288 aa2.32□□□□□ -2.04
UBP15YMR304W ORC3P54790 616 aa2.32□□□□□ -2.04
UBP15YMR304W HFD1Q04458 532 aa2.32□□□□□ -2.04
UBP15YMR304W VPS38Q05919 439 aa2.32□□□□□ -2.04
UBP15YMR304W YPR127WQ06494 345 aa2.32□□□□□ -2.04
UBP15YMR304W YDL086WQ07505 273 aa2.32□□□□□ -2.04
UBP15YMR304W AAD4Q07747 329 aa2.32□□□□□ -2.04
UBP15YMR304W GSH2Q08220 491 aa2.32□□□□□ -2.04
UBP15YMR304W MED7Q08278 222 aa2.32□□□□□ -2.04
UBP15YMR304W NHP6AP11632 93 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W FBA1P14540 359 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W ADK2P26364 225 aa2.32□□□□□ -2.04
UBP15YMR304W CAP1P28495 268 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W NDI1P32340 513 aa2.32□□□□□ -2.04
UBP15YMR304W MKK1P32490 508 aa2.32□□□□□ -2.04
UBP15YMR304W ECT1P33412 323 aa2.32□□□□□ -2.04
UBP15YMR304W CTF13P35203 478 aa2.32□□□□□ -2.04
UBP15YMR304W RPC25P35718 212 aa2.32□□□□□ -2.04
UBP15YMR304W YBR056WP38081 501 aa2.32□□□□□ -2.04
UBP15YMR304W IST2P38250 946 aa2.32□□□□□ -2.04
UBP15YMR304W BZZ1P38822 633 aa2.32□□□□□ -2.04
UBP15YMR304W YDR089WP38966 869 aa2.32□□□□□ -2.04
UBP15YMR304W PUG1P40100 303 aa2.32□□□□□ -2.04
UBP15YMR304W ATF1P40353 525 aa2.32□□□□□ -2.04
UBP15YMR304W CHS6P40955 746 aa2.32□□□□□ -2.04
UBP15YMR304W MMM1P41800 426 aa2.32□□□□□ -2.04
UBP15YMR304W COS6P53344 381 aa2.32□□□□□ -2.04
UBP15YMR304W MRPL19P53875 158 aa2.32□□□□□ -2.04
UBP15YMR304W SKI8Q02793 397 aaPredicted RBP2.32□□□□□ -2.04
UBP15YMR304W ARL3Q02804 198 aa2.32□□□□□ -2.04
UBP15YMR304W PEX25Q02969 394 aa2.32□□□□□ -2.04
UBP15YMR304W MRPL1Q04599 285 aa2.32□□□□□ -2.04
UBP15YMR304W CSM3Q04659 317 aa2.32□□□□□ -2.04
UBP15YMR304W RBS1Q05672 457 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W YPS7Q06325 596 aa2.32□□□□□ -2.04
UBP15YMR304W RAX1Q08760 435 aa2.32□□□□□ -2.04
UBP15YMR304W ELG1Q12050 791 aa2.32□□□□□ -2.04
UBP15YMR304W BTS1Q12051 335 aa2.32□□□□□ -2.04
UBP15YMR304W FAL1Q12099 399 aaKnown RBP2.32□□□□□ -2.04
UBP15YMR304W YLR122CQ12312 125 aa2.32□□□□□ -2.04
UBP15YMR304W COX3P00420 269 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-LR4P0C2I8 440 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W TY1A-DR6P0CX70 440 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms