RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 HDAC6Q9UBN7 1215 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 ZNRF3Q9ULT6 936 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 PLAGL2Q9UPG8 496 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 CAP2P40123 477 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 CDK17Q00537 523 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 BAP1Q92560 729 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 RUSC1Q9BVN2 902 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 ARGLU1Q9NWB6 273 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-229ENST00000641891 FHOD1Q9Y613 1164 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-229ENST00000641891 CHMP2AO43633 222 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 HNRNPH3P31942 346 aaKnown RBP18.76■□□□□ 0.59
PHGDH-229ENST00000641891 APBA1Q02410 837 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 CTTNQ14247 550 aaKnown RBP18.76■□□□□ 0.59
PHGDH-229ENST00000641891 CEP112Q8N8E3 955 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 UBE2Q2Q8WVN8 375 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 CEP63Q96MT8 703 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 PGAP2Q9UHJ9 254 aa18.76■□□□□ 0.59
PHGDH-229ENST00000641891 ZRANB2O95218 330 aaKnown RBP eCLIP18.75■□□□□ 0.59
PHGDH-229ENST00000641891 ATP1A1P05023 1023 aaKnown RBP18.75■□□□□ 0.59
PHGDH-229ENST00000641891 MYBP10242 640 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 HOXD13P35453 343 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 CXCL9Q07325 125 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 TMCO3Q6UWJ1 677 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 CHURC1Q8WUH1 139 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 IQCDQ96DY2 449 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 MYO6Q9UM54 1294 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
PHGDH-229ENST00000641891 NEK11Q8NG66 645 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 PIGOQ8TEQ8 1089 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 CRACR2AQ9BSW2 395 aa18.75■□□□□ 0.59
PHGDH-229ENST00000641891 WNT10BO00744 389 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 TBC1D12O60347 775 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 IPO7O95373 1038 aaKnown RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 PNMA6AP0CW24 399 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 POLD1P28340 1107 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 ADAM9Q13443 819 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 PDXDC1Q6P996 788 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 ZNF662Q6ZS27 426 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 TRIM59Q8IWR1 403 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 KRT222Q8N1A0 295 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 AGBL3Q8NEM8 1001 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 POLR3CQ9BUI4 534 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 NLRC4Q9NPP4 1024 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 MACROD2A1Z1Q3 448 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 ZBTB39O15060 712 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 KRT86O43790 486 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 NOL4O94818 638 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 KIF11P52732 1056 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 TUBB2AQ13885 445 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 LRCH2Q5VUJ6 765 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 FKBP1CQ5VVH2 108 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 FAM83AQ86UY5 434 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 LDHDQ86WU2 507 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 ZC3H3Q8IXZ2 948 aaKnown RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 SMAP1Q8IYB5 467 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 MTMR14Q8NCE2 650 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 DYDC2Q96IM9 177 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 ZBED3Q96IU2 234 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 TUBB2BQ9BVA1 445 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 LSM14BQ9BX40 385 aaKnown RBP18.74■□□□□ 0.59
PHGDH-229ENST00000641891 ANKZF1Q9H8Y5 726 aa18.74■□□□□ 0.59
PHGDH-229ENST00000641891 RBBP6Q7Z6E9 1792 aaKnown RBP18.73■□□□□ 0.59
PHGDH-229ENST00000641891 SRGAP2O75044 1071 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 PSMD10O75832 226 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 VAV2P52735 878 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 WHAMMP3Q1A5X7 153 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 CC2D1AQ6P1N0 951 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-229ENST00000641891 EPM2AIP1Q7L775 607 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-229ENST00000641891 TRAPPC11Q7Z392 1133 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 CACNA2D4Q7Z3S7 1137 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 TPH2Q8IWU9 490 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 ST7Q9NRC1 585 aa18.73■□□□□ 0.59
PHGDH-229ENST00000641891 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
PHGDH-229ENST00000641891 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.73■□□□□ 0.59
PHGDH-229ENST00000641891 SFI1A8K8P3 1242 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 KIF20AO95235 890 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 EYA4O95677 639 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 NR2F2P24468 414 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 INPP5BP32019 993 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 MARSP56192 900 aaKnown RBP18.72■□□□□ 0.59
PHGDH-229ENST00000641891 DGKZQ13574 1117 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 BMS1Q14692 1282 aaKnown RBP18.72■□□□□ 0.59
PHGDH-229ENST00000641891 SPA17Q15506 151 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 AGBL1Q96MI9 1066 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 HSD17B14Q9BPX1 270 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 ZNF341Q9BYN7 854 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 SLITRK3O94933 977 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 GNA14O95837 355 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 EGFRP00533 1210 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 ARP10275 920 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 EDRF1Q3B7T1 1238 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 FAM160B2Q86V87 743 aa18.72■□□□□ 0.59
PHGDH-229ENST00000641891 SLC5A5Q92911 643 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms