RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LCORQ96JN0 433 aaPredicted RBP7.41□□□□□ -1.22
CCDC7-216ENST00000640058 DLL4Q9NR61 685 aa7.41□□□□□ -1.22
CCDC7-216ENST00000640058 INVSQ9Y283 1065 aa7.41□□□□□ -1.22
CCDC7-216ENST00000640058 KCNK3O14649 394 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 CRTAMO95727 393 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 CKMP06732 381 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 KIAA2012Q0VF49 1180 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 SKIDA1Q1XH10 827 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 CD276Q5ZPR3 534 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 LRP10Q7Z4F1 713 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 FAM124AQ86V42 546 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 DTX3Q8N9I9 347 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 FBXW5Q969U6 566 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.22
CCDC7-216ENST00000640058 WRNIP1Q96S55 665 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 TMEM168Q9H0V1 697 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 FTSJ1Q9UET6 329 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 CBLCQ9ULV8 474 aa7.4□□□□□ -1.22
CCDC7-216ENST00000640058 ACOT7O00154 380 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 ARVCFO00192 962 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 CYP7B1O75881 506 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 DNM2P50570 870 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 ST5P78524 1137 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 PFKPQ01813 784 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 BTBD8Q5XKL5 378 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 BORAQ6PGQ7 559 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 ARHGAP36Q6ZRI8 547 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 OSTM1Q86WC4 334 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 PTRH1Q86Y79 214 aaKnown RBP7.39□□□□□ -1.23
CCDC7-216ENST00000640058 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
CCDC7-216ENST00000640058 LGI4Q8N135 537 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 KISS1RQ969F8 398 aaPredicted RBP7.39□□□□□ -1.23
CCDC7-216ENST00000640058 SLC52A2Q9HAB3 445 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 HSPBP1Q9NZL4 362 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 ZFP69BQ9UJL9 534 aa7.39□□□□□ -1.23
CCDC7-216ENST00000640058 K7ESM1 405 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 PDE6AP16499 860 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 EPHA5P54756 1037 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 GPR19Q15760 415 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 CISD2Q8N5K1 135 aaKnown RBP7.38□□□□□ -1.23
CCDC7-216ENST00000640058 SLC39A2Q9NP94 309 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 RIC8BQ9NVN3 520 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 ARHGAP20Q9P2F6 1191 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 SRPK3Q9UPE1 567 aa7.38□□□□□ -1.23
CCDC7-216ENST00000640058 ZNF536O15090 1300 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-216ENST00000640058 CCDC66A2RUB6 948 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 MAN2B1O00754 1011 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 B4GALT3O60512 393 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 FBXO21O94952 628 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 RASGRP1O95267 797 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 AMY2AP04746 511 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 COL6A1P12109 1028 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 AMY2BP19961 511 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 JAM2P57087 298 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 LONRF2Q1L5Z9 754 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 SOGA3Q5TF21 947 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 EP400NLQ6ZTU2 488 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 STPG3Q8N7X2 389 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 NUDT10Q8NFP7 164 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 SREK1Q8WXA9 508 aaKnown RBP7.37□□□□□ -1.23
CCDC7-216ENST00000640058 MKL1Q969V6 931 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 NUDT11Q96G61 164 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 OSBPL2Q9H1P3 480 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 ZDHHC9Q9Y397 364 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 PTCH2Q9Y6C5 1203 aa7.37□□□□□ -1.23
CCDC7-216ENST00000640058 C9orf118A6NHY6 69 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 ZNF839A8K0R7 811 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 ENO2P09104 434 aaPredicted RBP7.36□□□□□ -1.23
CCDC7-216ENST00000640058 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
CCDC7-216ENST00000640058 NAT1P18440 290 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 BMS1Q14692 1282 aaKnown RBP7.36□□□□□ -1.23
CCDC7-216ENST00000640058 CRY1Q16526 586 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 TBC1D10BQ4KMP7 808 aaPredicted RBP7.36□□□□□ -1.23
CCDC7-216ENST00000640058 FAM47CQ5HY64 1035 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 C16orf59Q7L2K0 433 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 SLC7A14Q8TBB6 771 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 MBD6Q96DN6 1003 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 TACO1Q9BSH4 297 aaKnown RBP7.36□□□□□ -1.23
CCDC7-216ENST00000640058 SFMBT1Q9UHJ3 866 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 ATP23Q9Y6H3 246 aa7.36□□□□□ -1.23
CCDC7-216ENST00000640058 WNT9AO14904 365 aa7.35□□□□□ -1.23
CCDC7-216ENST00000640058 PLATP00750 562 aa7.35□□□□□ -1.23
CCDC7-216ENST00000640058 SMAD2Q15796 467 aaKnown RBP7.35□□□□□ -1.23
CCDC7-216ENST00000640058 NLGN4XQ8N0W4 816 aa7.35□□□□□ -1.23
CCDC7-216ENST00000640058 LILRB2Q8N423 598 aa7.35□□□□□ -1.23
CCDC7-216ENST00000640058 THAP3Q8WTV1 239 aaPredicted RBP7.35□□□□□ -1.23
CCDC7-216ENST00000640058 COQ6Q9Y2Z9 468 aa7.35□□□□□ -1.23
CCDC7-216ENST00000640058 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-216ENST00000640058 ITGB3P05106 788 aa7.34□□□□□ -1.23
CCDC7-216ENST00000640058 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
CCDC7-216ENST00000640058 DBPQ10586 325 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-216ENST00000640058 NFATC3Q12968 1075 aa7.34□□□□□ -1.23
CCDC7-216ENST00000640058 C2orf27AQ580R0 203 aa7.34□□□□□ -1.23
CCDC7-216ENST00000640058 ZC3H12BQ5HYM0 836 aaKnown RBP7.34□□□□□ -1.23
CCDC7-216ENST00000640058 LIMS2Q7Z4I7 341 aa7.34□□□□□ -1.23
CCDC7-216ENST00000640058 BRAPQ7Z569 592 aa7.34□□□□□ -1.23
CCDC7-216ENST00000640058 KBTBD2Q8IY47 623 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms