RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CFAP58Q5T655 872 aa22.12■■□□□ 1.13
SYNGAP1-227ENST00000638142 FGFBP2Q9BYJ0 223 aa22.12■■□□□ 1.13
SYNGAP1-227ENST00000638142 GANQ9H2C0 597 aa22.12■■□□□ 1.13
SYNGAP1-227ENST00000638142 NFU1Q9UMS0 254 aa22.12■■□□□ 1.13
SYNGAP1-227ENST00000638142 CES2O00748 559 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 C10orf76Q5T2E6 689 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 DPP8Q6V1X1 898 aaPredicted RBP22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 NELFCDQ8IXH7 590 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 SCFD1Q8WVM8 642 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 TBC1D7Q9P0N9 293 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 KIAA1024Q9UPX6 916 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 EPS15P42566 896 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 HERC4Q5GLZ8 1057 aaPredicted RBP22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 GPATCH4Q5T3I0 446 aaKnown RBP22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 GPBP1Q86WP2 473 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 CD302Q8IX05 232 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 WHAMMQ8TF30 809 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 CCDC43Q96MW1 224 aaKnown RBP22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 EMILIN3Q9NT22 766 aa22.11■■□□□ 1.13
SYNGAP1-227ENST00000638142 BTAF1O14981 1849 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 E9PMD0 336 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 EIF6P56537 245 aaKnown RBP22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 CDC37Q16543 378 aaPredicted RBP22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 FAM133AQ8N9E0 248 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 PSTPIP2Q9H939 334 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 ADAMTS1Q9UHI8 967 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 DAGLAQ9Y4D2 1042 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 MYH7BA7E2Y1 1941 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 MYO3BQ8WXR4 1341 aa22.1■■□□□ 1.13
SYNGAP1-227ENST00000638142 ZBTB5O15062 677 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 TNNC1P63316 161 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 ADAM9Q13443 819 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 SKIDA1Q1XH10 827 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 KRT12Q99456 494 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 GLT8D2Q9H1C3 349 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 EHD4Q9H223 541 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 ATF5Q9Y2D1 282 aaPredicted RBP22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 PITPNM2Q9BZ72 1349 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 FRMD3A2A2Y4 597 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 CETN3O15182 167 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 CYP11B2P19099 503 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 C1orf131Q8NDD1 294 aaKnown RBP22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 IFT81Q8WYA0 676 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 GJA10Q969M2 543 aa22.09■■□□□ 1.13
SYNGAP1-227ENST00000638142 FAM153BP0C7A2 387 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 GTF2A1P52655 376 aaPredicted RBP22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 ARID5AQ03989 594 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 FAM153CQ494X1 144 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 USP38Q8NB14 1042 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 FAM153AQ9UHL3 310 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 KRT14P02533 472 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 KCNH2Q12809 1159 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 PICALMQ13492 652 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 EMC10Q5UCC4 262 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 EIF1ADQ8N9N8 165 aaKnown RBP22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 TAF4BQ92750 862 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 BZW2Q9Y6E2 419 aaKnown RBP22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 FAM169AQ9Y6X4 670 aa22.08■■□□□ 1.13
SYNGAP1-227ENST00000638142 ESYT3A0FGR9 886 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 POTEB3A0JP26 581 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 ZSCAN5CA6NGD5 496 aaPredicted RBP22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 ZNF233A6NK53 670 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 POTECB2RU33 542 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 DNA2P51530 1060 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 CRY2Q49AN0 593 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 TTBK2Q6IQ55 1244 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 POTEBQ6S5H4 581 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 KDM7AQ6ZMT4 941 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 CLEC10AQ8IUN9 316 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 SUGP1Q8IWZ8 645 aaKnown RBP22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 CASKIN2Q8WXE0 1202 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 PACSIN1Q9BY11 444 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 KCNMB3Q9NPA1 279 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 PLCB1Q9NQ66 1216 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 TMEM59LQ9UK28 342 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 IFI16Q16666 785 aaKnown RBP22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 PRR5LQ6MZQ0 368 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 KANSL2Q9H9L4 492 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 ARFGEF1Q9Y6D6 1849 aa22.07■■□□□ 1.12
SYNGAP1-227ENST00000638142 MYBP10242 640 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 USP11P51784 963 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 PLCD3Q8N3E9 789 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 SERPINB13Q9UIV8 391 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 PACSIN2Q9UNF0 486 aaPredicted RBP22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 NPHP3-ACAD11A0A0J9YXS1 232 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 ZEB2O60315 1214 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 KRT18P05783 430 aaKnown RBP22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 NR2F2P24468 414 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 RPS6KA1Q15418 735 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 FRMD5Q7Z6J6 570 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 MICALL1Q8N3F8 863 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 PIK3R5Q8WYR1 880 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 YY1AP1Q9H869 796 aa22.06■■□□□ 1.12
SYNGAP1-227ENST00000638142 USP17L10C9JJH3 530 aa22.05■■□□□ 1.12
SYNGAP1-227ENST00000638142 GUCY2CP25092 1073 aa22.05■■□□□ 1.12
SYNGAP1-227ENST00000638142 SLC12A3P55017 1021 aa22.05■■□□□ 1.12
SYNGAP1-227ENST00000638142 CACNB1Q02641 598 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms