RNA–Protein interactions for RNA: ENST00000637959.1

ATRX-224, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 86 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-224ENST00000637959 ADGRG3Q86Y34 549 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 REXO1Q8N1G1 1221 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 DEFB119Q8N690 84 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNF655Q8N720 491 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 MAPKAPK5-AS1Q8N8E1 139 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 KDF1Q8NAX2 398 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 PCSK9Q8NBP7 692 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNF280CQ8ND82 737 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 REPS2Q8NFH8 660 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 CMASQ8NFW8 434 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 FBXO18Q8NFZ0 1043 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 PJA1Q8NG27 643 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNRF2Q8NHG8 242 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 SREK1Q8WXA9 508 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 NANOS1Q8WY41 292 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 PIK3R5Q8WYR1 880 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 SARAFQ96BY9 339 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 PELI1Q96FA3 418 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 WNK4Q96J92 1243 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNF285Q96NJ3 590 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 FCRL4Q96PJ5 515 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ARXQ96QS3 562 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 SDHCQ99643 169 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 RNF5Q99942 180 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 MRPL4Q9BYD3 311 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 CCSER1Q9C0I3 900 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZMYND15Q9H091 742 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ADAM7Q9H2U9 754 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 SENP3Q9H4L4 574 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNF703Q9H7S9 590 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 SNRKQ9NRH2 765 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 UBQLN4Q9NRR5 601 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 INPP5EQ9NRR6 644 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 GTSE1Q9NYZ3 720 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 NOP53Q9NZM5 478 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 RNF14Q9UBS8 474 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNF70Q9UC06 446 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 MUTYHQ9UIF7 546 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 FBXL5Q9UKA1 691 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ANGEL1Q9UNK9 670 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 FOXA2Q9Y261 457 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ATG4BQ9Y4P1 393 aa-1.55□□□□□ -2.66
ATRX-224ENST00000637959 DYNC1LI1Q9Y6G9 523 aaKnown RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 ZNF646O15015 1829 aaPredicted RBP-1.55□□□□□ -2.66
ATRX-224ENST00000637959 YLPM1P49750 1951 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 MIA3Q5JRA6 1907 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 ZNF106Q9H2Y7 1883 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 MED12Q93074 2177 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 HSFX4A0A1B0GTS1 333 aaPredicted RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 MYOCOSA0A1B0GUC4 107 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 HSFX3A0A1B0GWH4 333 aaPredicted RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 PLEKHG3A1L390 1219 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 RBMY1BA6NDE4 496 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 TMEM8BA6NDV4 472 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L5A8MUK1 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L15C9J2P7 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L13C9JLJ4 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L12C9JPN9 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L11C9JVI0 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L21D6R901 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L18D6R9N7 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L22D6RA61 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L23D6RBM5 183 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L17D6RBQ6 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L19D6RCP7 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L20D6RJB6 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 PITPNM1O00562 1244 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 PLA2G10O15496 165 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 NKX2-8O15522 239 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 CCNT1O60563 726 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 ZNF354AO60765 605 aaPredicted RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 MAFO75444 373 aaPredicted RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 TOMM70O94826 608 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 NUDT3O95989 172 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 RBMY1DP0C7P1 496 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 TMEM253P0C7T8 217 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 LYNX1P0DP58 116 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 IGLL1P15814 213 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 CD44P16070 742 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 LGALS3P17931 250 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 RHCEP18577 417 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 RNASE4P34096 147 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 DRD3P35462 400 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 GRIK1P39086 918 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 ADH7P40394 386 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 CCT4P50991 539 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 GALK1P51570 392 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 ARSEP51690 589 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 SMTNP53814 917 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 DEFA3P59666 94 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 LILRA4P59901 499 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 CTAG1AP78358 180 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 RUNX1Q01196 453 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 ROM1Q03395 351 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 USP17L24Q0WX57 530 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 ERV3-1Q14264 604 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 RBMY1FQ15415 496 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 TRIP6Q15654 476 aaKnown RBP-1.56□□□□□ -2.66
ATRX-224ENST00000637959 LPAL2Q16609 132 aa-1.56□□□□□ -2.66
ATRX-224ENST00000637959 PTPN21Q16825 1174 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms