RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 C2orf54Q08AI8 447 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 C6orf203Q9P0P8 240 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 BTBD18B2RXH4 712 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 ODR4Q5SWX8 454 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 BBS5Q8N3I7 341 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 ENOX1Q8TC92 643 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 DYDC2Q96IM9 177 aa18.33■□□□□ 0.53
CACNA1A-253ENST00000637927 PLS3P13797 630 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 ZBTB17Q13105 803 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 NBPF10Q6P3W6 841 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 RFX3P48380 749 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 MCF2L2Q86YR7 1114 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 CDKL2Q92772 493 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 NDFIP2Q9NV92 336 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 SKAP2O75563 359 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 MOCS2O96007 188 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 EHHADHQ08426 723 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 NME3Q13232 169 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 ASZ1Q8WWH4 475 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 RAB17Q9H0T7 212 aa18.33■□□□□ 0.52
CACNA1A-253ENST00000637927 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 DNAJC6O75061 913 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 FGAP02671 866 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 POLE2P56282 527 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 PCGF5Q86SE9 256 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 NOSTRINQ8IVI9 506 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 YAF2Q8IY57 180 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 SIX6OS1Q8N1H7 587 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 PARD3Q8TEW0 1356 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 GNA14O95837 355 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 PPP1R14AQ96A00 147 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 SCG2P13521 617 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 ARL4DP49703 201 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 RUFY4Q6ZNE9 571 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 FANCBQ8NB91 859 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 BHMTQ93088 406 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 IFT43Q96FT9 208 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 SAR1BQ9Y6B6 198 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 ARIH2O95376 493 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 TRIML1Q8N9V2 468 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 OR6B3Q8NGW1 331 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 DYNLL2Q96FJ2 89 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 MCM8Q9UJA3 840 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 MAP3K7O43318 606 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 KRT17Q04695 432 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 KMT5AQ9NQR1 393 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 NRBP2Q9NSY0 501 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 GTSE1Q9NYZ3 720 aa18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 ARMCX3Q9UH62 379 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-253ENST00000637927 PHKG2P15735 406 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 AARS2Q5JTZ9 985 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 FAM196AQ6ZSG2 479 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 CCDC78A2IDD5 438 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 TLK1Q9UKI8 766 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 NBNO60934 754 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 LRRC74AQ0VAA2 488 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 DSCC1Q9BVC3 393 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 SENP1Q9P0U3 644 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 E2F8A0AVK6 867 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 PRKAB2O43741 272 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 POU5F1BQ06416 359 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 FANCLQ9NW38 375 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 EPS15L1Q9UBC2 864 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 IQANK1A0A1B0GTG1 560 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 CDC25AP30304 524 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 MAPK4P31152 587 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 ATXN3P54252 364 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 ANKRD20A4Q4UJ75 823 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 ANKRD20A8PQ5CZ79 823 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 ANKRD20A2Q5SQ80 823 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 ANKRD20A1Q5TYW2 823 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 ADALQ6DHV7 355 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 FAM47EQ6ZV65 393 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 KRT26Q7Z3Y9 468 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 NUDCD1Q96RS6 583 aa18.31■□□□□ 0.52
CACNA1A-253ENST00000637927 UBA6A0AVT1 1052 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 DENND3A2RUS2 1198 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 SYCE1LA8MT33 242 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 SEC24DO94855 1032 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 POLR2BP30876 1174 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 SCRN1Q12765 414 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 MIS18BP1Q6P0N0 1132 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 NSFP46459 744 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 SKOR1P84550 965 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 PKP1Q13835 747 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 TAS2R42Q7RTR8 314 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 UGGT2Q9NYU1 1516 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 SNX2O60749 519 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms