RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 VWA3BQ502W6 1294 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 ODR4Q5SWX8 454 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 MTMR8Q96EF0 704 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 FAM20AQ96MK3 541 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 MYH15Q9Y2K3 1946 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 ZBTB22O15209 634 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 TFRCP02786 760 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 NMT1P30419 496 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PPP1R2P41236 205 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 TRIM14Q14142 442 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PTPROQ16827 1216 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 RMDN3Q96TC7 470 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 LSM14BQ9BX40 385 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 TEKT3Q9BXF9 490 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 WDR11Q9BZH6 1224 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 IKZF4Q9H2S9 585 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 JADE2Q9NQC1 790 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 KIAA1551Q9HCM1 1747 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 CTAGE9A4FU28 777 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 MYBP10242 640 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 MAN2A1Q16706 1144 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 ZC2HC1CQ53FD0 456 aaPredicted RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 FAM83AQ86UY5 434 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 FAM178BQ8IXR5 827 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 ERO1AQ96HE7 468 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PAGR1Q9BTK6 254 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 RUSC1Q9BVN2 902 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 ZNF408Q9H9D4 720 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 COL4A3BPQ9Y5P4 624 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PEX10O60683 326 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 NDUFA10O95299 355 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PLEKP08567 350 aaPredicted RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 CASP5P51878 434 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 RPS6P62753 249 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 PPP2R3AQ06190 1150 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 KCNA1Q09470 495 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 EEPD1Q7L9B9 569 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 TRERF1Q96PN7 1200 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 TAAR1Q96RJ0 339 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 WDR18Q9BV38 432 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 NAA15Q9BXJ9 866 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 KCNMB3Q9NPA1 279 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 MORC2Q9Y6X9 1032 aaPredicted RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 SCN9AQ15858 1988 aa10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 DDX60LQ5H9U9 1706 aaKnown RBP10.69□□□□□ -0.7
CACNA1A-248ENST00000637774 CNTNAP1P78357 1384 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 TMEM150BA6NC51 233 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 BACH1O14867 736 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 NPM3O75607 178 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 RHOXF2BP0C7M4 288 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 RPA1P27694 616 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 SNRNP48Q6IEG0 339 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 RHOXF2Q9BQY4 288 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 LXNQ9BS40 222 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 PCIF1Q9H4Z3 704 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 TMOD4Q9NZQ9 345 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 ARMCX3Q9UH62 379 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 CCDC169A6NNP5 214 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 OPLAHO14841 1288 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 VCAM1P19320 739 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 USP8P40818 1118 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 KIF5AQ12840 1032 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 BAATQ14032 418 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 TMEM119Q4V9L6 283 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 MUM1L1Q5H9M0 696 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 CENPPQ6IPU0 288 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 RNF207Q6ZRF8 634 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 HS2ST1Q7LGA3 356 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 DNAJC19Q96DA6 116 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 CCDC51Q96ER9 411 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 CASZ1Q86V15 1759 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 ANKRD31Q8N7Z5 1873 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 DDNO94850 711 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 LRRC63Q05C16 580 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 ETNPPLQ8TBG4 499 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 TRPM4Q8TD43 1214 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 JAKMIP2Q96AA8 810 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 MAP7D2Q96T17 732 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 NHEJ1Q9H9Q4 299 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 KCNH7Q9NS40 1196 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
CACNA1A-248ENST00000637774 PPP1R12BO60237 982 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 MTMR1Q13613 665 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 SCFD1Q8WVM8 642 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 NUP58Q9BVL2 599 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 ATRNL1Q5VV63 1379 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 ADAMTSL1Q8N6G6 1762 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 LRRC10BA6NIK2 292 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 KRT86O43790 486 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 PRELPP51888 382 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 KRT83P78385 493 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 PSMD2Q13200 908 aa10.67□□□□□ -0.7
CACNA1A-248ENST00000637774 EAPPQ56P03 285 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms