RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ZIM3Q96PE6 472 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 ZBTB39O15060 712 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 GDF11O95390 407 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 TCP1P17987 556 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 HPDP32754 393 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 LIG3P49916 1009 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 IRAK1P51617 712 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 KCNH2Q12809 1159 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 TTMPQ5BVD1 217 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 FIGNQ5HY92 759 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 KIAA0825Q8IV33 1275 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 VIPAS39Q9H9C1 493 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 PCDHB13Q9Y5F0 798 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 CFAP221Q4G0U5 840 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 NAA35Q5VZE5 725 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 CAPS2Q9BXY5 557 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 CCDC88AQ3V6T2 1871 aa15.44■□□□□ 0.06
CACNA1A-228ENST00000636610 BACH1O14867 736 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 PLCG2P16885 1265 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 CASP4P49662 377 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 MRPL12P52815 198 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 PTK2Q05397 1052 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 PLS1Q14651 629 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 MMGT1Q8N4V1 131 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 PIGOQ8TEQ8 1089 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 P2RX7Q99572 595 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 DLEC1Q9Y238 1755 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 CEP104O60308 925 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 HSF2BPO75031 334 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 MYBP10242 640 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 GUCY1A3Q02108 690 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 ASTE1Q2TB18 679 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 MAATS1Q7Z4T9 603 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 TRIM31Q9BZY9 425 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 RIC8AQ9NPQ8 531 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 CDK17Q00537 523 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 ASPRV1Q53RT3 343 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 SFR1Q86XK3 245 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 CERS3Q8IU89 383 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 MICALL1Q8N3F8 863 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 RGL1Q9NZL6 768 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 ATP6V0A2Q9Y487 856 aa15.43■□□□□ 0.06
CACNA1A-228ENST00000636610 CYP11B2P19099 503 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 POLD1P28340 1107 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 SHMT1P34896 483 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 TMEM119Q4V9L6 283 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 ARSHQ5FYA8 562 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 CCDC65Q8IXS2 484 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 ZBTB5O15062 677 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 PPFIA4O75335 1185 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 PDIA5Q14554 519 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 ASIC2Q16515 512 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 RC3H1Q5TC82 1133 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 RDH13Q8NBN7 331 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 CEP72Q9P209 647 aa15.42■□□□□ 0.06
CACNA1A-228ENST00000636610 SERPING1P05155 500 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 COPB2P35606 906 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 NNTQ13423 1086 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ZCWPW2Q504Y3 356 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 CFAP58Q5T655 872 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 MAEAQ7L5Y9 396 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 PACS2Q86VP3 889 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 CATSPER3Q86XQ3 398 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 SEPT11Q9NVA2 429 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 CHORDC1Q9UHD1 332 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 AJAP1Q9UKB5 411 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 HDAC9Q9UKV0 1011 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 LAMB1P07942 1786 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 LAMB2P55268 1798 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 RAD51CO43502 376 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 PPP1R2P41236 205 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 EPHB4P54760 987 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 LLGL1Q15334 1064 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ZNF571Q7Z3V5 609 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 CASKIN2Q8WXE0 1202 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ANO3Q9BYT9 981 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ZC3H12CQ9C0D7 883 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 DDX47Q9H0S4 455 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 BHMT2Q9H2M3 363 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 GRID2IPA4D2P6 1211 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 EEF2P13639 858 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 IL1R1P14778 569 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ABCB4P21439 1286 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 CDC42EP5Q6NZY7 148 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 ZNF662Q6ZS27 426 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 REEP2Q9BRK0 252 aa15.41■□□□□ 0.06
CACNA1A-228ENST00000636610 COL22A1Q8NFW1 1626 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 MYH1P12882 1939 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 ESYT2A0FGR8 921 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 CETN3O15182 167 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 GCNT3O95395 438 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 SEC24CP53992 1094 aa15.4■□□□□ 0.06
CACNA1A-228ENST00000636610 PRPF4BQ13523 1007 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms