RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PSEN1P49768 467 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 UAP1Q16222 522 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 ANKRD20A8PQ5CZ79 823 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 CYB5D1Q6P9G0 228 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 CNOT10Q9H9A5 744 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 PACSIN2Q9UNF0 486 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 GHRP10912 638 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 GKAP1Q5VSY0 366 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 FUKQ8N0W3 1084 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 SLITRK6Q9H5Y7 841 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 ATP8B3O60423 1300 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 CEP104O60308 925 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 ELF1P32519 619 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 SPDYCQ5MJ68 293 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 TRIM59Q8IWR1 403 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 OSBPL7Q9BZF2 842 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 BMP2KQ9NSY1 1161 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 STX8Q9UNK0 236 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
CACNA1A-220ENST00000635988 USP17L3A6NCW0 530 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 USP17L4A6NCW7 530 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 SART1O43290 800 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 ANXA13P27216 316 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 SLC8A1P32418 973 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 TMEM119Q4V9L6 283 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 USP17L1Q7RTZ2 530 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 A0A0G2JS52 829 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 EZRP15311 586 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 PRDX5P30044 214 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 EPS15P42566 896 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 EIF3BP55884 814 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 LRRC41Q15345 812 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 FAM26FQ5R3K3 315 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 UBLCP1Q8WVY7 318 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 TATDN2Q93075 761 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 KDM4CQ9H3R0 1056 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 BCCIPQ9P287 314 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 FBXL5Q9UKA1 691 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 LEMD3Q9Y2U8 911 aa16.21■□□□□ 0.19
CACNA1A-220ENST00000635988 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 CLGNO14967 610 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 ERCC3P19447 782 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 COASYQ13057 564 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 XRCC4Q13426 336 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 FAM133AQ8N9E0 248 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 RAPGEF5Q92565 580 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 PACSIN1Q9BY11 444 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 FAM114A2Q9NRY5 505 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 MAST2Q6P0Q8 1798 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 OR2W6PQ8NHA6 318 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 CENPTQ96BT3 561 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 DYNLL2Q96FJ2 89 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 VEZTQ9HBM0 779 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 SUFUQ9UMX1 484 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 NOVA2Q9UNW9 492 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 MTMR7Q9Y216 660 aa16.2■□□□□ 0.18
CACNA1A-220ENST00000635988 DNM1LO00429 736 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 KRIT1O00522 736 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 DNAJC8O75937 253 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 ARID5AQ03989 594 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 LRRC57Q8N9N7 239 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 GANQ9H2C0 597 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 BIN2Q9UBW5 565 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 SCTRP47872 440 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 SYCE1Q8N0S2 351 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 SEC14L1Q92503 715 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 DNAJC19Q96DA6 116 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 PSMD1Q99460 953 aa16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 NOC2LQ9Y3T9 749 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-220ENST00000635988 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 TMOD1P28289 359 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 QPCTQ16769 361 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 KRT71Q3SY84 523 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 TMC3Q7Z5M5 1100 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 CCDC65Q8IXS2 484 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 RASGEF1CQ8N431 466 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 ABCA3Q99758 1704 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 FLOT1O75955 427 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 MAGOHP61326 146 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms