RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TRAF3IP3Q9Y228 551 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PPP2R3BQ9Y5P8 575 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ATRNL1Q5VV63 1379 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 CCDC188H7C350 402 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TEX33O43247 280 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PPFIA1Q13136 1202 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 C8orf74Q6P047 294 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 SMYD4Q8IYR2 804 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 IMPG2Q9BZV3 1241 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 GYPCP04921 128 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TNFAIP3P21580 790 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 HNRNPH3P31942 346 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 APOBEC3FQ8IUX4 373 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 FAM186BQ8IYM0 893 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 SLC35F6Q8N357 371 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 MCPH1Q8NEM0 835 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 AKT1S1Q96B36 256 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF341Q9BYN7 854 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 FEZ2Q9UHY8 353 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 FBXL5Q9UKA1 691 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PPME1Q9Y570 386 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 COL1A1P02452 1464 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 ATP8B3O60423 1300 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 SOWAHDA6NJG2 315 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 NOP2P46087 812 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 ARID5BQ14865 1188 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 RPS6KA1Q15418 735 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 MEA1Q16626 185 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ANKRD40Q6AI12 368 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 SYT2Q8N9I0 419 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 DALRD3Q5D0E6 543 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MSANTD4Q8NCY6 345 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 LSM14BQ9BX40 385 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 PARP2Q9UGN5 583 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 ANKRD36CQ5JPF3 1778 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 IRS2Q9Y4H2 1338 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TOGARAM1Q9Y4F4 1720 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TUBGCP6Q96RT7 1819 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 M0R2N6 131 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 KIF11P52732 1056 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MARSP56192 900 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 UBE2SQ16763 222 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 PDXDC1Q6P996 788 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 EMBQ6PCB8 327 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 RHOT2Q8IXI1 618 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 CNPY4Q8N129 248 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 KIFC2Q96AC6 838 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 LRRC4BQ9NT99 713 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF70Q9UC06 446 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 POTEMA6NI47 508 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 SLC16A2P36021 539 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 DMTNQ08495 405 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 STK4Q13043 487 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 USH1GQ495M9 461 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MICALCLQ6ZW33 695 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MTMR8Q96EF0 704 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MBOAT7Q96N66 472 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 DESI2Q9BSY9 194 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 ZBTB21Q9ULJ3 1066 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 SPDYE2BA6NHP3 402 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TMCO5BA8MYB1 307 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 SPDYE6P0CI01 402 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 CDC25AP30304 524 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 KIAA0753Q2KHM9 967 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TYW1BQ6NUM6 668 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 ENOSF1Q7L5Y1 443 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 UBL4BQ8N7F7 174 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 KCNMB3Q9NPA1 279 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 PRR12Q9ULL5 1215 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 PFASO15067 1338 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 A0A087WWV3 80 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 NFIL3Q16649 462 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 SAMD1Q6SPF0 538 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TPH2Q8IWU9 490 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MTMR14Q8NCE2 650 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 FAM71BQ8TC56 605 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 GPR101Q96P66 508 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MYMKA6NI61 221 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MIF4GDA9UHW6 222 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 WDR64B1ANS9 1081 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TCP10L2B9ZVM9 353 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 OAZ1P54368 228 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 YWHAEP62258 255 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 EARS2Q5JPH6 523 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TDRD3Q9H7E2 651 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 CTNND1O60716 968 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 DCAF17Q5H9S7 520 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 ODR4Q5SWX8 454 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 FAM83BQ5T0W9 1011 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 RBM46Q8TBY0 533 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 PUF60Q9UHX1 559 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 MACROD2A1Z1Q3 448 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 KLRC4O43908 158 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 POLR2FP61218 127 aaKnown RBP4.99□□□□□ -1.61
SCN1A-210ENST00000635776 SPDYE2Q495Y8 402 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 TOGARAM2Q6ZUX3 1019 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 HOXC10Q9NYD6 342 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 PCDHA13Q9Y5I0 950 aa4.99□□□□□ -1.61
SCN1A-210ENST00000635776 CD44P16070 742 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms