RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CELF3Q5SZQ8 465 aaKnown RBP16.25■□□□□ 0.19
LINC00339-208ENST00000634934 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
LINC00339-208ENST00000634934 ZSCAN30Q86W11 494 aa16.25■□□□□ 0.19
LINC00339-208ENST00000634934 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
LINC00339-208ENST00000634934 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
LINC00339-208ENST00000634934 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
LINC00339-208ENST00000634934 GOLGA6L4A6NEF3 574 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 POTEMA6NI47 508 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 CUTAO60888 179 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 GH1P01241 217 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 CCL5P13501 91 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 MAP3K21Q5TCX8 1036 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 LENG1Q96BZ8 264 aaPredicted RBP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 CSRNP2Q9H175 543 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 UNC45AQ9H3U1 944 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 SLC9A2Q9UBY0 812 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 LRWD1Q9UFC0 647 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 TCHHQ07283 1943 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 KIAA1217Q5T5P2 1943 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 NKRFO15226 690 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 SEPT4O43236 478 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 ADCY6O43306 1168 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 FARP2O94887 1054 aaPredicted RBP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 KRT76Q01546 638 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 SPECC1Q5M775 1068 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 METTL7BQ6UX53 244 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 OR6J1Q8NGC5 347 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 SAMM50Q9Y512 469 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 MKI67P46013 3256 aaKnown RBP16.24■□□□□ 0.19
LINC00339-208ENST00000634934 ELP1O95163 1332 aa16.24■□□□□ 0.19
LINC00339-208ENST00000634934 PP2D1A8MPX8 630 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 DYNC1LI2O43237 492 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-208ENST00000634934 CCNE2O96020 404 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 CDC25AP30304 524 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 ARHGAP1Q07960 439 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 SPIRE1Q08AE8 756 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 PDIA5Q14554 519 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-208ENST00000634934 ZNF746Q6NUN9 644 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-208ENST00000634934 MIER3Q7Z3K6 550 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 AP5M1Q9H0R1 490 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 HMX1Q9NP08 348 aaPredicted RBP16.23■□□□□ 0.19
LINC00339-208ENST00000634934 TELO2Q9Y4R8 837 aa16.23■□□□□ 0.19
LINC00339-208ENST00000634934 WDR64B1ANS9 1081 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 EML1O00423 815 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
LINC00339-208ENST00000634934 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
LINC00339-208ENST00000634934 RARBP10826 455 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 ACTR2P61160 394 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 TLK2Q86UE8 772 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 ERMNQ8TAM6 284 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 DISC1Q9NRI5 854 aa16.22■□□□□ 0.19
LINC00339-208ENST00000634934 GNEQ9Y223 722 aaKnown RBP16.22■□□□□ 0.19
LINC00339-208ENST00000634934 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.19
LINC00339-208ENST00000634934 UBA7P41226 1012 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 JAK3P52333 1124 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 ZRSR1Q15695 479 aaKnown RBP16.21■□□□□ 0.19
LINC00339-208ENST00000634934 HSDL1Q3SXM5 330 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 ADALQ6DHV7 355 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 SHC4Q6S5L8 630 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 B3GNT9Q6UX72 402 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 ZNF579Q8NAF0 562 aaKnown RBP16.21■□□□□ 0.19
LINC00339-208ENST00000634934 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 AK8Q96MA6 479 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC00339-208ENST00000634934 FRMPD3Q5JV73 1810 aa16.21■□□□□ 0.19
LINC00339-208ENST00000634934 GADD45BO75293 160 aaPredicted RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 SFNP31947 248 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 MIS18BP1Q6P0N0 1132 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 USP49Q70CQ1 688 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 SNX29Q8TEQ0 813 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 SEPT1Q8WYJ6 367 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 EMID1Q96A84 441 aaPredicted RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 DEFB118Q96PH6 123 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 GPR20Q99678 358 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 PAK6Q9NQU5 681 aaPredicted RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 DDX20Q9UHI6 824 aaKnown RBP16.2■□□□□ 0.18
LINC00339-208ENST00000634934 Q9Y3F1 56 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 PCDHA10Q9Y5I2 948 aa16.2■□□□□ 0.18
LINC00339-208ENST00000634934 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
LINC00339-208ENST00000634934 BACH1O14867 736 aa16.19■□□□□ 0.18
LINC00339-208ENST00000634934 ZNF500O60304 480 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-208ENST00000634934 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-208ENST00000634934 PSAPP07602 524 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms