RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ZNRF3Q9ULT6 936 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 IPO5O00410 1097 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 MSH4O15457 936 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 LMAN1P49257 510 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 PEX3P56589 373 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 FKBP3Q00688 224 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 TTC19Q6DKK2 380 aaPredicted RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 U2AF1L4Q8WU68 220 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 SECISBP2LQ93073 1101 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 RUSC1Q9BVN2 902 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 CCSER1Q9C0I3 900 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 NT5C3AQ9H0P0 336 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 MYOZ2Q9NPC6 264 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 ESYT3A0FGR9 886 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 LGALS16A8MUM7 142 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 VWA3BQ502W6 1294 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 MOB2Q70IA6 237 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 UNC13DQ70J99 1090 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 CDR2LQ86X02 465 aaPredicted RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 TAF4BQ92750 862 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 ATG4CQ96DT6 458 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 SAAL1Q96ER3 474 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 PARD6BQ9BYG5 372 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 COL14A1Q05707 1796 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 GAKO14976 1311 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 ATP1A1P05023 1023 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 FGRP09769 529 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 EPB41P11171 864 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 KRT5P13647 590 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 KRT83P78385 493 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 BIRC3Q13489 604 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 MTERF4Q7Z6M4 381 aaKnown RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 RTKN2Q8IZC4 609 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 GIMAP8Q8ND71 665 aaPredicted RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 CTNNBL1Q8WYA6 563 aaPredicted RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 RUFY1Q96T51 708 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 RPAP3Q9H6T3 665 aaPredicted RBP8.27□□□□□ -1.09
PKP4-217ENST00000628904 KBTBD4Q9NVX7 518 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 VPS18Q9P253 973 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 COL4A3BPQ9Y5P4 624 aa8.27□□□□□ -1.09
PKP4-217ENST00000628904 GOLGA6L9A6NEM1 432 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 SLC16A4O15374 487 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 NF2P35240 595 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 MTERF2Q49AM1 385 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 SFMBT2Q5VUG0 894 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 SNRNP48Q6IEG0 339 aaKnown RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 NYAP1Q6ZVC0 841 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 PPM1KQ8N3J5 372 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 DHTKD1Q96HY7 919 aaPredicted RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 LXNQ9BS40 222 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 ANKFY1Q9P2R3 1169 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 HACL1Q9UJ83 578 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 ITGB4P16144 1822 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 CEP350Q5VT06 3117 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 LAD1O00515 517 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 TACC1O75410 805 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 ASNSP08243 561 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 PAFAH1B1P43034 410 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 GCLMP48507 274 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 GUCY2FP51841 1108 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 BAATQ14032 418 aaPredicted RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 C2CD6Q53TS8 623 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 TTI2Q6NXR4 508 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 NFRKBQ6P4R8 1299 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 MS4A14Q96JA4 679 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 TAAR1Q96RJ0 339 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 DUSP9Q99956 384 aaKnown RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 GGA3Q9NZ52 723 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 MYO6Q9UM54 1294 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 FRMD4BQ9Y2L6 1034 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 MRPL11Q9Y3B7 192 aaKnown RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 MEIS2O14770 477 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 ZBED4O75132 1171 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 RHOBTB3O94955 611 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 KIF11P52732 1056 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 GABPAQ06546 454 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 SLC9C1Q4G0N8 1177 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 NLRX1Q86UT6 975 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 KRT222Q8N1A0 295 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 TAB3Q8N5C8 712 aaPredicted RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 UHMK1Q8TAS1 419 aaKnown RBP8.26□□□□□ -1.09
PKP4-217ENST00000628904 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
PKP4-217ENST00000628904 KIF20AO95235 890 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 CALCAP01258 141 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 KRT13P13646 458 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 EEF1GP26641 437 aaKnown RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 EXOC3L4Q17RC7 722 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 IRF2BP1Q8IU81 584 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 NOA1Q8NC60 698 aaKnown RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 IL31RAQ8NI17 732 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 ALS2CR12Q96Q35 445 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 P2RX7Q99572 595 aaKnown RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 LRRC27Q9C0I9 530 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 GCNT4Q9P109 453 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 SEPT9Q9UHD8 586 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms