RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
CCDC163-205ENST00000628397 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
CCDC163-205ENST00000628397 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
CCDC163-205ENST00000628397 STK24Q9Y6E0 443 aa13.75□□□□□ -0.21
CCDC163-205ENST00000628397 MYH9P35579 1960 aaKnown RBP13.74□□□□□ -0.21
CCDC163-205ENST00000628397 LOXHD1Q8IVV2 1947 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 PP2D1A8MPX8 630 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 EML1O00423 815 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 GADD45BO75293 160 aaPredicted RBP13.74□□□□□ -0.21
CCDC163-205ENST00000628397 PTMSP20962 102 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 CCND3P30281 292 aaPredicted RBP13.74□□□□□ -0.21
CCDC163-205ENST00000628397 ARHGAP1Q07960 439 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 LAMC2Q13753 1193 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 RESP18Q5W5W9 173 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 KRT79Q5XKE5 535 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 CABP7Q86V35 215 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
CCDC163-205ENST00000628397 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 SPATA33Q96N06 139 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 BCAS3Q9H6U6 928 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
CCDC163-205ENST00000628397 KDM3AQ9Y4C1 1321 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 SEPT4O43236 478 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 ADCY6O43306 1168 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 CCNE2O96020 404 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 PSAPP07602 524 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 CMA1P23946 247 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 CDC25AP30304 524 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 CCT6AP40227 531 aaKnown RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 ACTR2P61160 394 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 EPHA7Q15375 998 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 PKN2Q16513 984 aaKnown RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 MAP3K21Q5TCX8 1036 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 MIS18BP1Q6P0N0 1132 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 FBXO46Q6PJ61 603 aaPredicted RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 NEK9Q8TD19 979 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 EPSTI1Q96J88 318 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 HMX1Q9NP08 348 aaPredicted RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
CCDC163-205ENST00000628397 GNEQ9Y223 722 aaKnown RBP13.73□□□□□ -0.21
CCDC163-205ENST00000628397 A0A1B0GVL5 298 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 BACH1O14867 736 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
CCDC163-205ENST00000628397 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 RARBP10826 455 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 PFKFB1P16118 471 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 PTGS1P23219 599 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 USP49Q70CQ1 688 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 PPTC7Q8NI37 304 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
CCDC163-205ENST00000628397 EIF2AK1Q9BQI3 630 aaKnown RBP13.72□□□□□ -0.21
CCDC163-205ENST00000628397 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 Q9Y3F1 56 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 PCDHA10Q9Y5I2 948 aa13.72□□□□□ -0.21
CCDC163-205ENST00000628397 SLC26A4O43511 780 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 MSCO60682 206 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 DUSP11O75319 330 aaKnown RBP13.71□□□□□ -0.21
CCDC163-205ENST00000628397 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
CCDC163-205ENST00000628397 KARSQ15046 597 aaKnown RBP13.71□□□□□ -0.21
CCDC163-205ENST00000628397 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 HSDL1Q3SXM5 330 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
CCDC163-205ENST00000628397 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 PDILTQ8N807 584 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 AFG1LQ8WV93 481 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 SEPT1Q8WYJ6 367 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 DYDC2Q96IM9 177 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 GPR20Q99678 358 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
CCDC163-205ENST00000628397 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 SPC25Q9HBM1 224 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 TUFT1Q9NNX1 390 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 DDX20Q9UHI6 824 aaKnown RBP13.71□□□□□ -0.21
CCDC163-205ENST00000628397 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.21
CCDC163-205ENST00000628397 ARID2Q68CP9 1835 aa13.71□□□□□ -0.22
CCDC163-205ENST00000628397 SYNRGQ9UMZ2 1314 aa13.7□□□□□ -0.22
CCDC163-205ENST00000628397 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
CCDC163-205ENST00000628397 POTEB3A0JP26 581 aa13.7□□□□□ -0.22
CCDC163-205ENST00000628397 DKC1O60832 514 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC163-205ENST00000628397 MED24O75448 989 aa13.7□□□□□ -0.22
CCDC163-205ENST00000628397 MBD3O95983 291 aa13.7□□□□□ -0.22
CCDC163-205ENST00000628397 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
CCDC163-205ENST00000628397 MMP3P08254 477 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms