RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CRELD1Q96HD1 420 aa7.87□□□□□ -1.15
CDKL5-204ENST00000623364 ARRDC1-AS1Q9H2J1 176 aa7.87□□□□□ -1.15
CDKL5-204ENST00000623364 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
CDKL5-204ENST00000623364 NXF1Q9UBU9 619 aaKnown RBP7.87□□□□□ -1.15
CDKL5-204ENST00000623364 SAP30BPQ9UHR5 308 aaKnown RBP7.87□□□□□ -1.15
CDKL5-204ENST00000623364 RIPK3Q9Y572 518 aa7.87□□□□□ -1.15
CDKL5-204ENST00000623364 CELSR3Q9NYQ7 3312 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 FLT1P17948 1338 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 PLXNA4Q9HCM2 1894 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 C4orf47A7E2U8 309 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 H0Y626 953 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 NCAM2O15394 837 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 RAD21O60216 631 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 TRIM16O95361 564 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 THPOP40225 353 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 ERVFC1P60507 584 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 SERINC3Q13530 473 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 ZBTB41Q5SVQ8 909 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 PLPP4Q5VZY2 271 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDKL5-204ENST00000623364 CMTR2Q8IYT2 770 aaKnown RBP7.86□□□□□ -1.15
CDKL5-204ENST00000623364 C7orf31Q8N865 590 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 REPS2Q8NFH8 660 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 WDR11Q9BZH6 1224 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 SH2D4AQ9H788 454 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 AAASQ9NRG9 546 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 FBXO28Q9NVF7 368 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 GTF2IRD1Q9UHL9 959 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 PPP1R9AQ9ULJ8 1098 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 PCDHB12Q9Y5F1 795 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 RELNP78509 3460 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 PCNX1Q96RV3 2341 aa7.86□□□□□ -1.15
CDKL5-204ENST00000623364 SALL3Q9BXA9 1300 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 LRRK2Q5S007 2527 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 A0A1B0GTL3 188 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 A6NJR5 290 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 SHISA7A6NL88 538 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 FSCN2O14926 492 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 AXIN1O15169 862 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 HRO43593 1189 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 DGKIO75912 1065 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 BAG3O95817 575 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 GUCY1A2P33402 732 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 CEP68Q76N32 757 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 JADE2Q9NQC1 790 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 ENTPD7Q9NQZ7 604 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 SLC2A4RGQ9NR83 387 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 DZANK1Q9NVP4 752 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 TMEM260Q9NX78 707 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 SERPINB13Q9UIV8 391 aa7.85□□□□□ -1.15
CDKL5-204ENST00000623364 MTF2Q9Y483 593 aaPredicted RBP7.85□□□□□ -1.15
CDKL5-204ENST00000623364 NAV3Q8IVL0 2385 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 DENND4AQ7Z401 1863 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 B8ZZF3 427 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 MPHOSPH10O00566 681 aaKnown RBP7.84□□□□□ -1.15
CDKL5-204ENST00000623364 TDGF1P13385 188 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 ABCG1P45844 678 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 RPS9P46781 194 aaKnown RBP7.84□□□□□ -1.15
CDKL5-204ENST00000623364 ATG9AQ7Z3C6 839 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 C12orf76Q8N812 135 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-204ENST00000623364 CHST13Q8NET6 341 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 ZNF384Q8TF68 577 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 DNAAF4Q8WXU2 420 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 WNT8BQ93098 351 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 CLDN23Q96B33 292 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 LOXL4Q96JB6 756 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 MYADMQ96S97 322 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 TCF25Q9BQ70 676 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 DDX23Q9BUQ8 820 aaKnown RBP7.84□□□□□ -1.15
CDKL5-204ENST00000623364 EDEM2Q9BV94 578 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 STK31Q9BXU1 1019 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 VCPKMTQ9H867 229 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 ARHGEF10LQ9HCE6 1279 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 GPCPD1Q9NPB8 672 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 NGRNQ9NPE2 291 aaKnown RBP7.84□□□□□ -1.15
CDKL5-204ENST00000623364 COG6Q9Y2V7 657 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 CTDP1Q9Y5B0 961 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-204ENST00000623364 KIAA1671Q9BY89 1806 aa7.84□□□□□ -1.15
CDKL5-204ENST00000623364 MYH7BA7E2Y1 1941 aa7.84□□□□□ -1.16
CDKL5-204ENST00000623364 PDS5AQ29RF7 1337 aaKnown RBP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 A0A087WV48 116 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 NKRFO15226 690 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 SLC28A2O43868 658 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 FGF18O76093 207 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 POU3F2P20265 443 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 TMPOP42166 694 aaKnown RBP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 PHKA1P46020 1223 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 PRKCQQ04759 706 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 MTAPQ13126 283 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 MDM1Q8TC05 714 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 NANOS1Q8WY41 292 aaKnown RBP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 NELL2Q99435 816 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 EHD4Q9H223 541 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 HDAC6Q9UBN7 1215 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 IL17BQ9UHF5 180 aa7.83□□□□□ -1.16
CDKL5-204ENST00000623364 PUF60Q9UHX1 559 aaKnown RBP7.83□□□□□ -1.16
CDKL5-204ENST00000623364 AHCTF1Q8WYP5 2266 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 HIDE1A8MVS5 230 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms