RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 FDX2Q6P4F2 183 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 TMEM87AQ8NBN3 555 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 ASB2Q96Q27 587 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 UBL7Q96S82 380 aaPredicted RBP6.1□□□□□ -1.43
SRSF4-207ENST00000622143 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
SRSF4-207ENST00000622143 LRFN3Q9BTN0 628 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 PLA2G12BQ9BX93 195 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 PRDM12Q9H4Q4 367 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 LRRFIP2Q9Y608 721 aaKnown RBP6.1□□□□□ -1.43
SRSF4-207ENST00000622143 FRMPD3Q5JV73 1810 aa6.1□□□□□ -1.43
SRSF4-207ENST00000622143 PTPRFP10586 1907 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 DOCK1Q14185 1865 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 TRIM43BA6NCK2 446 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 GRXCR1A8MXD5 290 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 F6X3S4 739 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 PAGE1O75459 146 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 ZEB1P37275 1124 aaPredicted RBP6.09□□□□□ -1.43
SRSF4-207ENST00000622143 RGS3P49796 1198 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 KCNQ1P51787 676 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 SMAD3P84022 425 aaKnown RBP6.09□□□□□ -1.43
SRSF4-207ENST00000622143 TFF2Q03403 129 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 SPP2Q13103 211 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 UBE4AQ14139 1066 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 MAP3K21Q5TCX8 1036 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 WDR78Q5VTH9 848 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 FERMT2Q96AC1 680 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 TRIM43Q96BQ3 446 aaPredicted RBP6.09□□□□□ -1.43
SRSF4-207ENST00000622143 SNX27Q96L92 541 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 PAGR1Q9BTK6 254 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 STK31Q9BXU1 1019 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 ASCC2Q9H1I8 757 aaPredicted RBP6.09□□□□□ -1.43
SRSF4-207ENST00000622143 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 CWC22Q9HCG8 908 aaKnown RBP6.09□□□□□ -1.43
SRSF4-207ENST00000622143 TXNRD2Q9NNW7 524 aa6.09□□□□□ -1.43
SRSF4-207ENST00000622143 ATRNL1Q5VV63 1379 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 TCF20Q9UGU0 1960 aaKnown RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 DDTLA6NHG4 134 aaPredicted RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 GAS2O43903 313 aaKnown RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 ECEL1O95672 775 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 ZNF853P0CG23 659 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 CAPN2P17655 700 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 ITGB8P26012 769 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 MRPS5P82675 430 aaKnown RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 LRRC24Q50LG9 513 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 FKBP1CQ5VVH2 108 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 SULF2Q8IWU5 870 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 CCAR1Q8IX12 1150 aaKnown RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 KLHDC4Q8TBB5 520 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 TBC1D22AQ8WUA7 517 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 DNAAF4Q8WXU2 420 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 UTP4Q969X6 686 aaKnown RBP6.08□□□□□ -1.44
SRSF4-207ENST00000622143 RUNDC1Q96C34 613 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 TIFAQ96CG3 184 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 NRSN2Q9GZP1 204 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 PORCNQ9H237 461 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 PDLIM7Q9NR12 457 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 FLRT1Q9NZU1 646 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
SRSF4-207ENST00000622143 MAST3O60307 1309 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 CLSPNQ9HAW4 1339 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 DNAH12Q6ZR08 3092 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 LOC100289279A0A1B0GTE1 492 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 MAOBP27338 520 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 PRDX5P30044 214 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 GNAI1P63096 354 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 IRX3P78415 501 aaPredicted RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 WDR43Q15061 677 aaKnown RBP eCLIP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 SHROOM1Q2M3G4 852 aaPredicted RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 METTL24Q5JXM2 366 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 HHIPL2Q6UWX4 724 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 SLC39A5Q6ZMH5 540 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 CCDC129Q6ZRS4 1044 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 SV2BQ7L1I2 683 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 ARMC10Q8N2F6 343 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 TRPV1Q8NER1 839 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 STK35Q8TDR2 534 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 P2RX7Q99572 595 aaKnown RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 CORO1BQ9BR76 489 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 C1QTNF1Q9BXJ1 281 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 DDX4Q9NQI0 724 aaKnown RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 RAD18Q9NS91 495 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 IFT57Q9NWB7 429 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 DDX20Q9UHI6 824 aaKnown RBP6.07□□□□□ -1.44
SRSF4-207ENST00000622143 LOC285556D6RIA3 1793 aa6.07□□□□□ -1.44
SRSF4-207ENST00000622143 SYNGAP1Q96PV0 1343 aa6.06□□□□□ -1.44
SRSF4-207ENST00000622143 APAF1O14727 1248 aa6.06□□□□□ -1.44
SRSF4-207ENST00000622143 CTNND1O60716 968 aaKnown RBP6.06□□□□□ -1.44
SRSF4-207ENST00000622143 COBLO75128 1261 aa6.06□□□□□ -1.44
SRSF4-207ENST00000622143 CTSBP07858 339 aa6.06□□□□□ -1.44
SRSF4-207ENST00000622143 NME2P22392 152 aa6.06□□□□□ -1.44
SRSF4-207ENST00000622143 CYP2C19P33261 490 aa6.06□□□□□ -1.44
SRSF4-207ENST00000622143 ZNF76P36508 570 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms