RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 USP38Q8NB14 1042 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 ATP6V1G3Q96LB4 118 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-211ENST00000622020 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
NPHP4-211ENST00000622020 DPH5Q9H2P9 285 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 IKZF4Q9H2S9 585 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 LRRC4CQ9HCJ2 640 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 BMP2KQ9NSY1 1161 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-211ENST00000622020 AMACRQ9UHK6 382 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 COPB2P35606 906 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-211ENST00000622020 CHADLQ6NUI6 762 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 NEDD1Q8NHV4 660 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-211ENST00000622020 GOLGA6L10A6NI86 522 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 NR2F2P24468 414 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 CTNNA1P35221 906 aaKnown RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 FXR2P51116 673 aaKnown RBP eCLIP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 ZNF571Q7Z3V5 609 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 NLRP14Q86W24 1093 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 EPN3Q9H201 632 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 EMILIN3Q9NT22 766 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 DLEC1Q9Y238 1755 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 DCDC2CA8MYV0 355 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 MEFVO15553 781 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 CPP00450 1065 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 HSD17B3P37058 310 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 PTGISQ16647 500 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 GLE1Q53GS7 698 aaKnown RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 SCFD1Q8WVM8 642 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 PPP1R11O60927 126 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 TM4SF1P30408 202 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 MDH1P40925 334 aaKnown RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 SNAP25P60880 206 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 POTEGQ6S5H5 508 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 POTEEQ6S8J3 1075 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 B4GALNT4Q76KP1 1039 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 IQCDQ96DY2 449 aa17.29■□□□□ 0.36
NPHP4-211ENST00000622020 LUC7LQ9NQ29 371 aaKnown RBP17.29■□□□□ 0.36
NPHP4-211ENST00000622020 DAPK3O43293 454 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 AKR1B1P15121 316 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 TNNC1P63316 161 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 ZCWPW2Q504Y3 356 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 SLC30A10Q6XR72 485 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 KDM7AQ6ZMT4 941 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 JPH2Q9BR39 696 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-211ENST00000622020 YY1AP1Q9H869 796 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 CD248Q9HCU0 757 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 SART1O43290 800 aaKnown RBP17.28■□□□□ 0.36
NPHP4-211ENST00000622020 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-211ENST00000622020 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
NPHP4-211ENST00000622020 MCTP2Q6DN12 878 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 GEMIN8Q9NWZ8 242 aaKnown RBP17.28■□□□□ 0.36
NPHP4-211ENST00000622020 TSKSQ9UJT2 592 aa17.28■□□□□ 0.36
NPHP4-211ENST00000622020 PHLPP1O60346 1717 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 SFI1A8K8P3 1242 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 CLIC2O15247 247 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 PSMC6P62333 389 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 SEMA3FQ13275 785 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.36
NPHP4-211ENST00000622020 MFSD14BQ5SR56 506 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 TRIM59Q8IWR1 403 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 ADGRF4Q8IZF3 695 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
NPHP4-211ENST00000622020 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 RTCBQ9Y3I0 505 aaKnown RBP17.27■□□□□ 0.36
NPHP4-211ENST00000622020 STRCQ7RTU9 1775 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 MYH1P12882 1939 aa17.27■□□□□ 0.36
NPHP4-211ENST00000622020 SMIM23A6NLE4 172 aa17.27■□□□□ 0.35
NPHP4-211ENST00000622020 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.35
NPHP4-211ENST00000622020 KRIT1O00522 736 aa17.27■□□□□ 0.35
NPHP4-211ENST00000622020 MYZAPP0CAP1 466 aa17.27■□□□□ 0.35
NPHP4-211ENST00000622020 GSTO1P78417 241 aa17.27■□□□□ 0.35
NPHP4-211ENST00000622020 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.35
NPHP4-211ENST00000622020 FBXL5Q9UKA1 691 aa17.27■□□□□ 0.35
NPHP4-211ENST00000622020 PCDHGC5Q9Y5F6 944 aa17.27■□□□□ 0.35
NPHP4-211ENST00000622020 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 UAP1Q16222 522 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-211ENST00000622020 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 ALKBH5Q6P6C2 394 aaKnown RBP17.26■□□□□ 0.35
NPHP4-211ENST00000622020 METTL13Q8N6R0 699 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 JMJD4Q9H9V9 463 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 NOVA2Q9UNW9 492 aaKnown RBP17.26■□□□□ 0.35
NPHP4-211ENST00000622020 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 RBAK-RBAKDNI3L0D1 243 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 TTI1O43156 1089 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms