RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 STAT2P52630 851 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 HERVK_113P62684 666 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 LONRF2Q1L5Z9 754 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 FIGNQ5HY92 759 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 CNNM4Q6P4Q7 775 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 FASTKD5Q7L8L6 764 aaKnown RBP19.38■□□□□ 0.69
FAM3A-222ENST00000621967 CCDC102AQ96A19 550 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 CNOT6LQ96LI5 555 aaKnown RBP19.38■□□□□ 0.69
FAM3A-222ENST00000621967 RPAP3Q9H6T3 665 aaPredicted RBP19.38■□□□□ 0.69
FAM3A-222ENST00000621967 LOC285556D6RIA3 1793 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 MAP2K7O14733 419 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 SLC10A3P09131 477 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 CETPP11597 493 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 GRM1Q13255 1194 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 MIIPQ5JXC2 388 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 KIAA0895Q8NCT3 520 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 CALML4Q96GE6 196 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 ERGIC2Q96RQ1 377 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 BIN2Q9UBW5 565 aaPredicted RBP19.37■□□□□ 0.69
FAM3A-222ENST00000621967 STK17AQ9UEE5 414 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 CCL15-CCL14A0A0B4J2E2 113 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 FCER1AP12319 257 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 GRB10Q13322 594 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 CCL15Q16663 113 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 TSR1Q2NL82 804 aaKnown RBP19.37■□□□□ 0.69
FAM3A-222ENST00000621967 TTBK2Q6IQ55 1244 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 BLOC1S4Q9NUP1 217 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 MYO6Q9UM54 1294 aa19.37■□□□□ 0.69
FAM3A-222ENST00000621967 A0A1W2PQJ5 194 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 CTAGE15A4D2H0 777 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 PES1O00541 588 aaKnown RBP19.36■□□□□ 0.69
FAM3A-222ENST00000621967 EDIL3O43854 480 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 CTAGE8P0CG41 777 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 SLC16A2P36021 539 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 ZBED6P86452 979 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 CENPPQ6IPU0 288 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
FAM3A-222ENST00000621967 CTAGE6Q86UF2 777 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 CTAGE4Q8IX94 777 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 PNKPQ96T60 521 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 UBA5Q9GZZ9 404 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 VAT1LQ9HCJ6 419 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 TMEM260Q9NX78 707 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 TRIM10Q9UDY6 481 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 FEM1BQ9UK73 627 aa19.36■□□□□ 0.69
FAM3A-222ENST00000621967 FLOT1O75955 427 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 KRT83P78385 493 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 CDK17Q00537 523 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 TBC1D8BQ0IIM8 1120 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 SMC1AQ14683 1233 aaKnown RBP19.35■□□□□ 0.69
FAM3A-222ENST00000621967 BEND6Q5SZJ8 279 aaPredicted RBP19.35■□□□□ 0.69
FAM3A-222ENST00000621967 TREML2Q5T2D2 321 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 TRAPPC11Q7Z392 1133 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 MSL3Q8N5Y2 521 aaKnown RBP19.35■□□□□ 0.69
FAM3A-222ENST00000621967 CHURC1Q8WUH1 139 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 MS4A4AQ96JQ5 239 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 PNMA5Q96PV4 448 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 AGPAT5Q9NUQ2 364 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 GUCA1BQ9UMX6 200 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 MYH10P35580 1976 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 PVALEFA0A1B0GWK0 134 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L15C9J2P7 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L13C9JLJ4 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L11C9JVI0 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L18D6R9N7 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L22D6RA61 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L17D6RBQ6 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L19D6RCP7 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L20D6RJB6 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 TFRCP02786 760 aaKnown RBP19.35■□□□□ 0.69
FAM3A-222ENST00000621967 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
FAM3A-222ENST00000621967 ADCY7P51828 1080 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 USP17L24Q0WX57 530 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 CALCRLQ16602 461 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 DEFB115Q30KQ5 88 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 PPP1R18Q6NYC8 613 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 SV2BQ7L1I2 683 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 FAM160B2Q86V87 743 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 CCDC170Q8IYT3 715 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 IQCDQ96DY2 449 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 AGTPBP1Q9UPW5 1226 aa19.35■□□□□ 0.69
FAM3A-222ENST00000621967 EIF3CLB5ME19 914 aaKnown RBP19.34■□□□□ 0.69
FAM3A-222ENST00000621967 TRIM21P19474 475 aaKnown RBP19.34■□□□□ 0.69
FAM3A-222ENST00000621967 CYP2C19P33261 490 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 CYLC1P35663 651 aaPredicted RBP19.34■□□□□ 0.69
FAM3A-222ENST00000621967 TXKP42681 527 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.696e-7■■■□□ 16
FAM3A-222ENST00000621967 SYDE2Q5VT97 1194 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 CYP4F22Q6NT55 531 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 UNC13DQ70J99 1090 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 EIF3CQ99613 913 aaKnown RBP19.34■□□□□ 0.69
FAM3A-222ENST00000621967 NOC4LQ9BVI4 516 aaKnown RBP19.34■□□□□ 0.69
FAM3A-222ENST00000621967 SEMA6BQ9H3T3 888 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 ABCB11O95342 1321 aa19.34■□□□□ 0.69
FAM3A-222ENST00000621967 MANSC4A6NHS7 340 aaPredicted RBP19.33■□□□□ 0.69
FAM3A-222ENST00000621967 MYMKA6NI61 221 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 FAM155AB1AL88 458 aaPredicted RBP19.33■□□□□ 0.69
FAM3A-222ENST00000621967 SLC37A4O43826 429 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms