RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SRGAP2CP0DJJ0 459 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 AMY2BP19961 511 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 IL13P35225 146 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 FAM26FQ5R3K3 315 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 UBXN11Q5T124 520 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 DTX3Q8N9I9 347 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 SLC7A14Q8TBB6 771 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 FBXW5Q969U6 566 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 BDH2Q9BUT1 245 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 NDOR1Q9UHB4 597 aa6.78□□□□□ -1.32
BRCA1-229ENST00000621897 CD276Q5ZPR3 534 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 VASNQ6EMK4 673 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 ARHGAP36Q6ZRI8 547 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 OSTM1Q86WC4 334 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 GSTCDQ8NEC7 633 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 YTHDC1Q96MU7 727 aaKnown RBP6.77□□□□□ -1.33
BRCA1-229ENST00000621897 SRPK3Q9UPE1 567 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 PTCH2Q9Y6C5 1203 aa6.77□□□□□ -1.33
BRCA1-229ENST00000621897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-229ENST00000621897 MROH6A6NGR9 719 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 MAN2B1O00754 1011 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 RASGRP1O95267 797 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 CKMP06732 381 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 COL6A1P12109 1028 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 PDE6AP16499 860 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 JAM2P57087 298 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 BMS1Q14692 1282 aaKnown RBP6.76□□□□□ -1.33
BRCA1-229ENST00000621897 GPR19Q15760 415 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 ZC3H12BQ5HYM0 836 aaKnown RBP6.76□□□□□ -1.33
BRCA1-229ENST00000621897 PTRH1Q86Y79 214 aaKnown RBP6.76□□□□□ -1.33
BRCA1-229ENST00000621897 THAP3Q8WTV1 239 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-229ENST00000621897 DLL4Q9NR61 685 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 CATSPERZQ9NTU4 200 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 CDK11AQ9UQ88 783 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-229ENST00000621897 NUB1Q9Y5A7 615 aa6.76□□□□□ -1.33
BRCA1-229ENST00000621897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-229ENST00000621897 FAM90A27PA6NNH2 459 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 KCNK3O14649 394 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 CELA3BP08861 270 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 KRT15P19012 456 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 PFKPQ01813 784 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 C2orf27AQ580R0 203 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 TRIM61Q5EBN2 209 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 TRMT10BQ6PF06 316 aaKnown RBP6.75□□□□□ -1.33
BRCA1-229ENST00000621897 C16orf59Q7L2K0 433 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 ZC3H7AQ8IWR0 971 aaKnown RBP6.75□□□□□ -1.33
BRCA1-229ENST00000621897 MBD6Q96DN6 1003 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 SCLYQ96I15 445 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 L2HGDHQ9H9P8 463 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 SMURF1Q9HCE7 757 aa6.75□□□□□ -1.33
BRCA1-229ENST00000621897 CCDC66A2RUB6 948 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 ZNF839A8K0R7 811 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 CYP1A1P04798 512 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-229ENST00000621897 GLRBP48167 497 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 DNM2P50570 870 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 BTBD8Q5XKL5 378 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 ZSWIM2Q8NEG5 633 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 NUDT10Q8NFP7 164 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 NUDT11Q96G61 164 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-229ENST00000621897 WRNIP1Q96S55 665 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 SLC39A2Q9NP94 309 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 ZFP69BQ9UJL9 534 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 INVSQ9Y283 1065 aa6.74□□□□□ -1.33
BRCA1-229ENST00000621897 C9orf118A6NHY6 69 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 B4GALT3O60512 393 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 IL18BPO95998 194 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 PTPN1P18031 435 aaKnown RBP6.73□□□□□ -1.33
BRCA1-229ENST00000621897 NAT1P18440 290 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 ST5P78524 1137 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 PLP2Q04941 152 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 FSTL4Q6MZW2 842 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 BRAPQ7Z569 592 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 FGD2Q7Z6J4 655 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 CISD2Q8N5K1 135 aaKnown RBP6.73□□□□□ -1.33
BRCA1-229ENST00000621897 TMEM168Q9H0V1 697 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 KANSL2Q9H9L4 492 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 RIC8BQ9NVN3 520 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 COQ6Q9Y2Z9 468 aa6.73□□□□□ -1.33
BRCA1-229ENST00000621897 EFCAB14O75071 495 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 CYP7B1O75881 506 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 KLHL18O94889 574 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 ENO2P09104 434 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-229ENST00000621897 KIAA2012Q0VF49 1180 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 DBPQ10586 325 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-229ENST00000621897 SEC23AQ15436 765 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 TBC1D10BQ4KMP7 808 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-229ENST00000621897 FIGNQ5HY92 759 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 NLGN4XQ8N0W4 816 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 LGI4Q8N135 537 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 STPG3Q8N7X2 389 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 TRIM39Q9HCM9 518 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 KCND1Q9NSA2 647 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 ARHGAP20Q9P2F6 1191 aa6.72□□□□□ -1.33
BRCA1-229ENST00000621897 ATP23Q9Y6H3 246 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 536.8 ms