RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 DONSONQ9NYP3 566 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 SUFUQ9UMX1 484 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 A6NJR5 290 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 ZBED4O75132 1171 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 KRT37O76014 449 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 TMCC1O94876 653 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 TRMT10CQ7L0Y3 403 aaKnown RBP7.71□□□□□ -1.18
COLCA1-205ENST00000620864 SLFN12Q8IYM2 578 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 ABI1Q8IZP0 508 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 TTLL6Q8N841 843 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF713Q8N859 430 aaPredicted RBP7.71□□□□□ -1.18
COLCA1-205ENST00000620864 ARL2BPQ9Y2Y0 163 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 SPATA31A6Q5VVP1 1343 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 SAMD9Q5K651 1589 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 C21orf2O43822 256 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 CCDC22O60826 627 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 CASP2P42575 452 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 ADCY7P51828 1080 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 MRPS35P82673 323 aaKnown RBP7.71□□□□□ -1.18
COLCA1-205ENST00000620864 KPNA7A9QM74 516 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 NBPF26B4DH59 902 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 HEXIM1O94992 359 aaKnown RBP7.71□□□□□ -1.18
COLCA1-205ENST00000620864 PARD3BQ8TEW8 1205 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.71□□□□□ -1.18
COLCA1-205ENST00000620864 THAP11Q96EK4 314 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 SYNDIG1Q9H7V2 258 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 CNGB3Q9NQW8 809 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 IL1RAPL1Q9NZN1 696 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 L3MBTL1Q9Y468 752 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 MAP3K5Q99683 1374 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 DTNBO60941 627 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 HSPA13P48723 471 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 CYTH1Q15438 398 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 MYCT1Q8N699 235 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 MIGA1Q8NAN2 632 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 TDRD7Q8NHU6 1098 aaKnown RBP7.71□□□□□ -1.18
COLCA1-205ENST00000620864 NUDCD1Q96RS6 583 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 ZMYND12Q9H0C1 365 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.18
COLCA1-205ENST00000620864 SH3TC1Q8TE82 1336 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 RAD17O75943 681 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 PABPC4Q13310 644 aaKnown RBP eCLIP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 HDDC2Q7Z4H3 204 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 PLEKHM2Q8IWE5 1019 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 SLC10A4Q96EP9 437 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 ANKRD27Q96NW4 1050 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 COG4Q9H9E3 785 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 MRPL47Q9HD33 250 aaKnown RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 WDR47O94967 919 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 CMA1P23946 247 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 HSPA9P38646 679 aaKnown RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 MAGOHBQ96A72 148 aaKnown RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 LRRC2Q9BYS8 371 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 AS3MTQ9HBK9 375 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 A0A1W2PQ27 194 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 A0A1W2PQ64 194 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 A0A1W2PQD8 194 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 CD19P15391 556 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 MRPS25P82663 173 aaKnown RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 KLC1Q07866 573 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 ST13P5Q8NFI4 369 aaPredicted RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 CFAP36Q96G28 342 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 DYDC2Q96IM9 177 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 PITPNM3Q9BZ71 974 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 DENND2AQ9ULE3 1009 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 DAB2IPQ5VWQ8 1189 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 NCAPG2Q86XI2 1143 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 KLC2Q9H0B6 622 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 ZMYND8Q9ULU4 1186 aaPredicted RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 FNDC3AQ9Y2H6 1198 aaKnown RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 EXOC1LA0A1B0GW35 172 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF263O14978 683 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 CASP8Q14790 479 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 PPP6R3Q5H9R7 873 aaPredicted RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 DEFB132Q7Z7B7 95 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 METTL13Q8N6R0 699 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 LINS1Q8NG48 757 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 DPH5Q9H2P9 285 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 FAM207AQ9NSI2 230 aaPredicted RBP7.7□□□□□ -1.18
COLCA1-205ENST00000620864 EHD2Q9NZN4 543 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 ZBTB22O15209 634 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 E2F6O75461 281 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 BRD1O95696 1058 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 CABP7Q86V35 215 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 TRIM69Q86WT6 500 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 KIAA0825Q8IV33 1275 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 PANX2Q96RD6 677 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 PSMB7Q99436 277 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 ARHGAP9Q9BRR9 750 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 KIF17Q9P2E2 1029 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 HESX1Q9UBX0 185 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 TRAF3IP3Q9Y228 551 aa7.7□□□□□ -1.18
COLCA1-205ENST00000620864 hCG_2014768A0A024R1R8 64 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MYO1FO00160 1098 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 GCFC2P16383 781 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PAMP19021 973 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ST13P50502 369 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF157P51786 506 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MORF4L2Q15014 288 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms