RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SOCS7O14512 581 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 USP14P54578 494 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 REPS2Q8NFH8 660 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 ATRIPQ8WXE1 791 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 CNOT6LQ96LI5 555 aaKnown RBP19.46■□□□□ 0.71
CNOT3-209ENST00000617930 DESI2Q9BSY9 194 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.46■□□□□ 0.71
CNOT3-209ENST00000617930 CCPG1Q9ULG6 757 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 PPP2R2CQ9Y2T4 447 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 V9GYY5 206 aaPredicted RBP19.46■□□□□ 0.71
CNOT3-209ENST00000617930 BICDL2A1A5D9 508 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 FRMD3A2A2Y4 597 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 KLK7P49862 253 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 PABPC4Q13310 644 aaKnown RBP eCLIP19.46■□□□□ 0.712e-10■■■■□ 21.2
CNOT3-209ENST00000617930 MUM1L1Q5H9M0 696 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 TREML2Q5T2D2 321 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 PPFIBP1Q86W92 1011 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 ZNF397Q8NF99 534 aaPredicted RBP19.46■□□□□ 0.71
CNOT3-209ENST00000617930 HSD17B14Q9BPX1 270 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 EIF2AK1Q9BQI3 630 aaKnown RBP19.46■□□□□ 0.71
CNOT3-209ENST00000617930 OGFRQ9NZT2 677 aa19.46■□□□□ 0.71
CNOT3-209ENST00000617930 ZBTB39O15060 712 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 PPP1R12BO60237 982 aaPredicted RBP19.45■□□□□ 0.7
CNOT3-209ENST00000617930 PEX10O60683 326 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 TUBB4AP04350 444 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 FECHP22830 423 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 TRAF1Q13077 416 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 ZCWPW2Q504Y3 356 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 SH3D19Q5HYK7 790 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 SYT10Q6XYQ8 523 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 LRRC55Q6ZSA7 311 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 CPXCR1Q8N123 301 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 NOC3LQ8WTT2 800 aaKnown RBP19.45■□□□□ 0.7
CNOT3-209ENST00000617930 SLC5A5Q92911 643 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 LRRC27Q9C0I9 530 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 POLD4Q9HCU8 107 aa19.45■□□□□ 0.7
CNOT3-209ENST00000617930 LOC285556D6RIA3 1793 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 IRF6O14896 467 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 SLC26A4O43511 780 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 ITGB5P18084 799 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 DMTNQ08495 405 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 PSMD2Q13200 908 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 GIT2Q14161 759 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 CEP55Q53EZ4 464 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 HAUS3Q68CZ6 603 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 RRAGCQ9HB90 399 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 RIPK3Q9Y572 518 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 VWA5AO00534 786 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 SLITRK3O94933 977 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 PPP1R2P41236 205 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 ERVK-24P63145 666 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 TEX2Q8IWB9 1127 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 SYT2Q8N9I0 419 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-209ENST00000617930 ANKRD20A12PQ8NF67 263 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
CNOT3-209ENST00000617930 ABHD10Q9NUJ1 306 aa19.44■□□□□ 0.7
CNOT3-209ENST00000617930 WRAP73Q9P2S5 460 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-209ENST00000617930 TTC26A0AVF1 554 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 C19orf81C9J6K1 198 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 GJA5P36382 358 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 CASP5P51878 434 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 CTTNQ14247 550 aaKnown RBP19.43■□□□□ 0.7
CNOT3-209ENST00000617930 ELF2Q15723 593 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 FAM26FQ5R3K3 315 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 B3GNT9Q6UX72 402 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 CATSPERGQ6ZRH7 1159 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 POLR3CQ9BUI4 534 aaPredicted RBP19.43■□□□□ 0.7
CNOT3-209ENST00000617930 MRPL44Q9H9J2 332 aaKnown RBP19.43■□□□□ 0.7
CNOT3-209ENST00000617930 RPTORQ8N122 1335 aa19.43■□□□□ 0.7
CNOT3-209ENST00000617930 A0A1W2PQC6 194 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 ZSCAN20P17040 1043 aaPredicted RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 IREB2P48200 963 aaKnown RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 PNMA8AQ86V59 439 aaPredicted RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 SCFD1Q8WVM8 642 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 PURBQ96QR8 312 aaKnown RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 RUSC1Q9BVN2 902 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 TTYH3Q9C0H2 523 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 HOMER2Q9NSB8 354 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 ADAMTS5Q9UNA0 930 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 CLEC11AQ9Y240 323 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 CHMP2AO43633 222 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 ERCC3P19447 782 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 DSG3P32926 999 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 GHRHRQ02643 423 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 PPP2R5CQ13362 524 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 HERC4Q5GLZ8 1057 aaPredicted RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 UTP14CQ5TAP6 766 aaKnown RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 LRCH2Q5VUJ6 765 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 MYOCDQ8IZQ8 938 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 ERMNQ8TAM6 284 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 REEP2Q9BRK0 252 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 MAGEC2Q9UBF1 373 aaPredicted RBP19.42■□□□□ 0.7
CNOT3-209ENST00000617930 DNM3Q9UQ16 869 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 CSADQ9Y600 493 aa19.42■□□□□ 0.7
CNOT3-209ENST00000617930 RSPH10B2B2RC85 870 aa19.41■□□□□ 0.7
CNOT3-209ENST00000617930 RSPH10BP0C881 870 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms