RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MYO6Q9UM54 1294 aa15.96■□□□□ 0.15
SHROOM1-208ENST00000617339 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 FAM86B1E9PN63 330 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 RHOBTB3O94955 611 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 FAM86B2P0C5J1 330 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 PLA2G4BP0C869 781 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 CXCR5P32302 372 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 CT47A1Q5JQC4 288 aaPredicted RBP15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 FAM169AQ9Y6X4 670 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 ROBO3Q96MS0 1386 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 EBAG9O00559 213 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 AKR1B10O60218 316 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 DAGLBQ8NCG7 672 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 MTMR9Q96QG7 549 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 PURBQ96QR8 312 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 JADE2Q9NQC1 790 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 PRR12Q9ULL5 1215 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 MAP2K2P36507 400 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 DLK2Q6UY11 383 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 BCAS4Q8TDM0 211 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 RAD54LQ92698 747 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 DHX36Q9H2U1 1008 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 CXorf56Q9H5V9 222 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 MED4Q9NPJ6 270 aa15.95■□□□□ 0.14
SHROOM1-208ENST00000617339 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 RPS6KA5O75582 802 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 FAM26FQ5R3K3 315 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 CYP26C1Q6V0L0 522 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 TMEM179Q6ZVK1 233 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 LIMA1Q9UHB6 759 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 KCNA1Q09470 495 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 EAPPQ56P03 285 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 CIAPIN1Q6FI81 312 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 DHX37Q8IY37 1157 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 AK8Q96MA6 479 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 TIAM2Q8IVF5 1701 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 WNK3Q9BYP7 1800 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 MYCLP12524 364 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 ALAS1P13196 640 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 FAM76AQ8TAV0 307 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 CCDC42Q96M95 316 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
SHROOM1-208ENST00000617339 LAD1O00515 517 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 BUB1O43683 1085 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 AGBL1Q96MI9 1066 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 GOLGA6CA6NDK9 693 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 LGALS16A8MUM7 142 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 MEIS2O14770 477 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 GOLGA6DP0CG33 693 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 HNRNPH1P31943 449 aaKnown RBP15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 COASYQ13057 564 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 CENPHQ9H3R5 247 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 GOLGA6AQ9NYA3 693 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 HPCAL4Q9UM19 191 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 BICDL2A1A5D9 508 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 NDUFA10O95299 355 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 BANK1Q8NDB2 785 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 MMS19Q96T76 1030 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 ZNF341Q9BYN7 854 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 LACRTQ9GZZ8 138 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 ZNF70Q9UC06 446 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 CAPN7Q9Y6W3 813 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 ECM29Q5VYK3 1845 aa15.93■□□□□ 0.14
SHROOM1-208ENST00000617339 RBAK-RBAKDNI3L0D1 243 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 PRPHP41219 470 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 CASP5P51878 434 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 STAT2P52630 851 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 GNGT1P63211 74 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 CATSPER3Q86XQ3 398 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 TMTC1Q8IUR5 882 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 PANX2Q96RD6 677 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 NDST4Q9H3R1 872 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 SMARCAL1Q9NZC9 954 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 INPP5BP32019 993 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 WHAMMP3Q1A5X7 153 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 ELOA2Q8IYF1 753 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 JPH2Q9BR39 696 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 ZNF185O15231 689 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 GCNT3O95395 438 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 TSG101Q99816 390 aa15.92■□□□□ 0.14
SHROOM1-208ENST00000617339 IGKV6D-41A0A0C4DH26 115 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 TMEM150BA6NC51 233 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 MYBL2P10244 700 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 DNM2P50570 870 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 POLR2FP61218 127 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 ADAM9Q13443 819 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 DHTKD1Q96HY7 919 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 DNM3Q9UQ16 869 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 SNHG28P0DPA3 235 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 ACTN1P12814 892 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 RAPGEF1Q13905 1077 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 C7orf25Q9BPX7 421 aa15.91■□□□□ 0.14
SHROOM1-208ENST00000617339 NHEJ1Q9H9Q4 299 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms