RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ICAM3P32942 547 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 TECP42680 631 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 NDUFA8P51970 172 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 PDE4DQ08499 809 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 SNW1Q13573 536 aaKnown RBP9.06□□□□□ -0.96
PCDH9-205ENST00000614931 MTMR1Q13613 665 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 STXBP2Q15833 593 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 TMEM63BQ5T3F8 832 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 B3GNT9Q6UX72 402 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 EEPD1Q7L9B9 569 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
PCDH9-205ENST00000614931 MRPS27Q92552 414 aaKnown RBP9.06□□□□□ -0.96
PCDH9-205ENST00000614931 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
PCDH9-205ENST00000614931 GPRASP2Q96D09 838 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 FAM20AQ96MK3 541 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 UNC45AQ9H3U1 944 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 TTC12Q9H892 705 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-205ENST00000614931 XPNPEP3Q9NQH7 507 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 PDGFCQ9NRA1 345 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 MYH11P35749 1972 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 LOC102724159A0A0B4J2E5 919 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ASB14A6NK59 587 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SPATA31C2B4DYI2 1134 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 DDX39AO00148 427 aaKnown RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 IPO5O00410 1097 aaKnown RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ADCY6O43306 1168 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 TRAK2O60296 914 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SORBS3O60504 671 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 EIF3JO75822 258 aaKnown RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 STAM2O75886 525 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 CCNE2O96020 404 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 PGK1P00558 417 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 UBA1P22314 1058 aaKnown RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 LONP1P36776 959 aaKnown RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ADCYAP1R1P41586 468 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SP2Q02086 613 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 GRB10Q13322 594 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ACVR2BQ13705 512 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SNX17Q15036 470 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 PWP2Q15269 919 aaKnown RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ECM1Q16610 540 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 NCAPH2Q6IBW4 605 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SLC39A5Q6ZMH5 540 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SEPT14Q6ZU15 432 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ZNF577Q9BSK1 485 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 ABHD16BQ9H3Z7 469 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
PCDH9-205ENST00000614931 TMEM63CQ9P1W3 806 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
PCDH9-205ENST00000614931 GOLGA6L4A6NEF3 574 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 CHMP2AO43633 222 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 ACTN4O43707 911 aaKnown RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 GAS7O60861 476 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 ADAMTS4O75173 837 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 DUSP11O75319 330 aaKnown RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 MED24O75448 989 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 MAGEA10P43363 369 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 ATN1P54259 1190 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 RTP1P59025 263 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 PPP2R5CQ13362 524 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 KARSQ15046 597 aaKnown RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 E2F4Q16254 413 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 KLHL40Q2TBA0 621 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 C1orf53Q5VUE5 145 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 TAPT1Q6NXT6 567 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 CCDC62Q6P9F0 684 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 RNF180Q86T96 592 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 NLRX1Q86UT6 975 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 COPS5Q92905 334 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 LENG1Q96BZ8 264 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 PLIN2Q99541 437 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 RIT2Q99578 217 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 PANK2Q9BZ23 570 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 CCSER1Q9C0I3 900 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 DACT1Q9NYF0 836 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 LRWD1Q9UFC0 647 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 ZHX1Q9UKY1 873 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-205ENST00000614931 PCDHA12Q9UN75 941 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 NFASCO94856 1347 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 SYNRGQ9UMZ2 1314 aa9.04□□□□□ -0.96
PCDH9-205ENST00000614931 A0A087WWV3 80 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 RBM47A0AV96 593 aaKnown RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 POTEB3A0JP26 581 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 MARCH6O60337 910 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 ZNF202O95125 648 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 MBD3O95983 291 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 MYCNP04198 464 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 PTMSP20962 102 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 NKX3-2P78367 333 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms