RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GOLGA6BA6NDN3 693 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 GOLGA8JA6NMD2 632 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 M0QZ92 97 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 HNRNPDLO14979 420 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 FOXN1O15353 648 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 EZRP15311 586 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 HNRNPH1P31943 449 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 IGSF22Q8N9C0 903 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 GOLGA4Q13439 2230 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 CETN3O15182 167 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 MYL3P08590 195 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 HPDP32754 393 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 GRIN1Q05586 938 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 MTMR1Q13613 665 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 ADALQ6DHV7 355 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 APOBEC3HQ6NTF7 200 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 SLC7A3Q8WY07 619 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 TBC1D5Q92609 795 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 NAPGQ99747 312 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 ADARB2Q9NS39 739 aaKnown RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
FAM3A-221ENST00000612856 RP1L1Q8IWN7 2480 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-221ENST00000612856 E9PMD0 336 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 EGFRP00533 1210 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CTNNA2P26232 953 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 TRPC3Q13507 836 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CEP85LQ5SZL2 805 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 RAET1EQ8TD07 263 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 TAF4BQ92750 862 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 PNKPQ96T60 521 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CAPS2Q9BXY5 557 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 GBA2Q9HCG7 927 aaPredicted RBP11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CD2APQ9Y5K6 639 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 MYO1FO00160 1098 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CTSHP09668 335 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 PDHBP11177 359 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 USP49Q70CQ1 688 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 ANKRD13AQ8IZ07 590 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.87□□□□□ -0.51
FAM3A-221ENST00000612856 MRFAP1Q9Y605 127 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTECB2RU33 542 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 TBC1D31Q96DN5 1066 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CABS1Q96KC9 395 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 CD248Q9HCU0 757 aa11.87□□□□□ -0.51
FAM3A-221ENST00000612856 PRDM5Q9NQX1 630 aaPredicted RBP11.87□□□□□ -0.51
FAM3A-221ENST00000612856 KIF4AO95239 1232 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 PLCG1P19174 1290 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 LIG4P49917 911 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 MAATS1Q7Z4T9 603 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 FAM160B2Q86V87 743 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 CDR2LQ86X02 465 aaPredicted RBP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 FCER1AP12319 257 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 ZNF543Q08ER8 600 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 THNSL1Q8IYQ7 743 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 EHD4Q9H223 541 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 PAK1Q13153 545 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 SLC39A14Q15043 492 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 MICALCLQ6ZW33 695 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 NLRP7Q8WX94 980 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 INPP5FQ9Y2H2 1132 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 EIF4E1BA6NMX2 242 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms