RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 CELF3Q5SZQ8 465 aaKnown RBP12.04□□□□□ -0.48
SSX3-204ENST00000612497 ASTLQ6HA08 431 aaPredicted RBP12.04□□□□□ -0.48
SSX3-204ENST00000612497 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 UBALD2Q8IYN6 164 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 PANK1Q8TE04 598 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
SSX3-204ENST00000612497 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
SSX3-204ENST00000612497 MFSD1Q9H3U5 465 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 SETD4Q9NVD3 440 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 SMARCA5O60264 1052 aaPredicted RBP12.03□□□□□ -0.48
SSX3-204ENST00000612497 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 GHRP10912 638 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 HOXC8P31273 242 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 MCF2L2Q86YR7 1114 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 KCNG4Q8TDN1 519 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 CNTNAP3BQ96NU0 1288 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 CNTNAP3Q9BZ76 1288 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 MAF1Q9H063 256 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 MLXIPQ9HAP2 919 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 SORCS3Q9UPU3 1222 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 KMT2BQ9UMN6 2715 aaPredicted RBP12.03□□□□□ -0.48
SSX3-204ENST00000612497 FRYLO94915 3013 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 ABCB11O95342 1321 aa12.03□□□□□ -0.48
SSX3-204ENST00000612497 BRD1O95696 1058 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 CHRNA1P02708 482 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 SRGAP2BP0DMP2 458 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
SSX3-204ENST00000612497 PAN2Q504Q3 1202 aaKnown RBP12.02□□□□□ -0.49
SSX3-204ENST00000612497 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
SSX3-204ENST00000612497 KCNV1Q6PIU1 500 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 CMTR2Q8IYT2 770 aaKnown RBP12.02□□□□□ -0.49
SSX3-204ENST00000612497 VN1R2Q8NFZ6 395 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 ATP8B4Q8TF62 1192 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 CPVLQ9H3G5 476 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 PXMP2Q9NR77 195 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 NR2E1Q9Y466 385 aa12.02□□□□□ -0.49
SSX3-204ENST00000612497 ORC4O43929 436 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 LGALS2P05162 132 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 GOLGA8HP0CJ92 632 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
SSX3-204ENST00000612497 TECP42680 631 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 CLCN5P51795 746 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 ARHGAP4P98171 946 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 SP2Q02086 613 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.49
SSX3-204ENST00000612497 LPIN1Q14693 890 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
SSX3-204ENST00000612497 DUSP6Q16828 381 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 TSHZ3Q63HK5 1081 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 KIAA2013Q8IYS2 634 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 GPATCH3Q96I76 525 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 SMOC2Q9H3U7 446 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 CCDC171Q6TFL3 1326 aa12.01□□□□□ -0.49
SSX3-204ENST00000612497 ACACBO00763 2458 aa12□□□□□ -0.49
SSX3-204ENST00000612497 DNAH14Q0VDD8 3507 aa12□□□□□ -0.49
SSX3-204ENST00000612497 FSD2A1L4K1 749 aa12□□□□□ -0.49
SSX3-204ENST00000612497 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
SSX3-204ENST00000612497 CFBP00751 764 aa12□□□□□ -0.49
SSX3-204ENST00000612497 UBA1P22314 1058 aaKnown RBP12□□□□□ -0.49
SSX3-204ENST00000612497 ANKRD54Q6NXT1 300 aa12□□□□□ -0.49
SSX3-204ENST00000612497 FLCNQ8NFG4 579 aa12□□□□□ -0.49
SSX3-204ENST00000612497 CDCA3Q99618 268 aaPredicted RBP12□□□□□ -0.49
SSX3-204ENST00000612497 S1PR5Q9H228 398 aa12□□□□□ -0.49
SSX3-204ENST00000612497 EHMT1Q9H9B1 1298 aa12□□□□□ -0.49
SSX3-204ENST00000612497 MRPL11Q9Y3B7 192 aaKnown RBP12□□□□□ -0.49
SSX3-204ENST00000612497 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
SSX3-204ENST00000612497 CEP250Q9BV73 2442 aa12□□□□□ -0.49
SSX3-204ENST00000612497 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
SSX3-204ENST00000612497 SNHG28P0DPA3 235 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 TGFB3P10600 412 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 SPOUT1Q5T280 376 aaKnown RBP11.99□□□□□ -0.49
SSX3-204ENST00000612497 GPATCH4Q5T3I0 446 aaKnown RBP11.99□□□□□ -0.49
SSX3-204ENST00000612497 NPAS4Q8IUM7 802 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 LMBR1Q8WVP7 490 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 ZFP91Q96JP5 570 aaPredicted RBP11.99□□□□□ -0.49
SSX3-204ENST00000612497 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 TCP11L1Q9NUJ3 509 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 ANAPC4Q9UJX5 808 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 PCDHB12Q9Y5F1 795 aa11.99□□□□□ -0.49
SSX3-204ENST00000612497 LOXHD1Q8IVV2 1947 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 C2CD4DB7Z1M9 353 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 DHX16O60231 1041 aaKnown RBP11.98□□□□□ -0.49
SSX3-204ENST00000612497 LMNAP02545 664 aaKnown RBP11.98□□□□□ -0.49
SSX3-204ENST00000612497 STAG3L1P0CL83 205 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 GATMP50440 423 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 ADAM17P78536 824 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 UBE3AQ05086 875 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 ANGPT1Q15389 498 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 LLGL2Q6P1M3 1020 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 SYCE2Q6PIF2 218 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 TMEM184AQ6ZMB5 413 aa11.98□□□□□ -0.49
SSX3-204ENST00000612497 RSPH3Q86UC2 560 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms