RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 BEX3Q00994 111 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 KARSQ15046 597 aaKnown RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 MYSM1Q5VVJ2 828 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 TIFAQ96CG3 184 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 PDE1AP54750 535 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 BROXQ5VW32 411 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 GAS2L3Q86XJ1 694 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 AGBL3Q8NEM8 1001 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 RNF186Q9NXI6 227 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 FAN1Q9Y2M0 1017 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 NR2E1Q9Y466 385 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 GNG11P61952 73 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 PPP2R5AQ15172 486 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 DTHD1Q6ZMT9 781 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 POMGNT1Q8WZA1 660 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 ATP2A3Q93084 1043 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 MRPS23Q9Y3D9 190 aaKnown RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 PIK3C2GO75747 1445 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 IRF6O14896 467 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 RASGRP1O95267 797 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 CTTNQ14247 550 aaKnown RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 MRPL50Q8N5N7 158 aaKnown RBP7.55□□□□□ -1.2
ABCA13-208ENST00000611776 TBC1D16Q8TBP0 767 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 PHACTR3Q96KR7 559 aa7.55□□□□□ -1.2
ABCA13-208ENST00000611776 SMCO2A6NFE2 343 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 HUS1O60921 280 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 DNAJC21Q5F1R6 531 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 STRIP1Q5VSL9 837 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 LRCH2Q5VUJ6 765 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 PDZD4Q76G19 769 aaPredicted RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 IFNL3Q8IZI9 196 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 DDX12PQ92771 950 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 DYNLL2Q96FJ2 89 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 EPSTI1Q96J88 318 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 WDR11Q9BZH6 1224 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 ATXN3LQ9H3M9 355 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 EFCAB6Q5THR3 1501 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 LACTBP83111 547 aaPredicted RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 NMIQ13287 307 aaPredicted RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 ADCK2Q7Z695 626 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 PPP1R13LQ8WUF5 828 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 CCDC68Q9H2F9 335 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 KDRP35968 1356 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 NPC1L1Q9UHC9 1359 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 ERLIN1O75477 346 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 RALAP11233 206 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 MAPK8P45983 427 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 GPM6BQ13491 265 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 TMEM179Q6ZVK1 233 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 RELL1Q8IUW5 271 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 NEK1Q96PY6 1258 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 MTG1Q9BT17 334 aaPredicted RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 RUVBL2Q9Y230 463 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 MYMKA6NI61 221 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 EIF3CLB5ME19 914 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 EPB41P11171 864 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 EPHB3P54753 998 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 CALCRLQ16602 461 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 STKLD1Q8NE28 680 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 TRPM4Q8TD43 1214 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 HASPINQ8TF76 798 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 KIFAP3Q92845 792 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 FEZ2Q9UHY8 353 aaPredicted RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 METP08581 1390 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 TBC1D3BA6NDS4 549 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 WDR46O15213 610 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 ATP1A1P05023 1023 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 GNSP15586 552 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 RTP1P59025 263 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 GTF2H3Q13889 308 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 STX1AQ16623 288 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 CASC4Q6P4E1 433 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 SYT10Q6XYQ8 523 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 SCARA5Q6ZMJ2 495 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 Q6ZUG5 572 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 MAFAQ8NHW3 353 aaPredicted RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 OSBPL2Q9H1P3 480 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 CYP4F11Q9HBI6 524 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 INPP4BO15327 924 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 FDX1P10109 184 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 KRT81Q14533 505 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 SLC10A5Q5PT55 438 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 C10orf67Q8IYJ2 551 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 AFAP1L1Q8TED9 768 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 CRACR2AQ9BSW2 395 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 USP26Q9BXU7 913 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 ZNF302Q9NR11 478 aa7.54□□□□□ -1.2
ABCA13-208ENST00000611776 TSR3Q9UJK0 312 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 SRPRBQ9Y5M8 271 aaKnown RBP7.54□□□□□ -1.2
ABCA13-208ENST00000611776 UGGT2Q9NYU1 1516 aa7.53□□□□□ -1.2
ABCA13-208ENST00000611776 IKBKBO14920 756 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms