RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 DAPK3O43293 454 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 PDHBP11177 359 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 CACNB3P54284 484 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 PLS1Q14651 629 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 PIK3R5Q8WYR1 880 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 ANKRD2Q9GZV1 360 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 DCCP43146 1447 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 HGSO14964 777 aaPredicted RBP22.39■■□□□ 1.18
SSBP3-216ENST00000610401 SERPING1P05155 500 aa22.39■■□□□ 1.18
SSBP3-216ENST00000610401 ACTN3Q08043 901 aaPredicted RBP22.39■■□□□ 1.18
SSBP3-216ENST00000610401 IKQ13123 557 aaPredicted RBP22.39■■□□□ 1.18
SSBP3-216ENST00000610401 KCNV1Q6PIU1 500 aa22.39■■□□□ 1.18
SSBP3-216ENST00000610401 RDH13Q8NBN7 331 aa22.39■■□□□ 1.18
SSBP3-216ENST00000610401 MTMR9Q96QG7 549 aa22.39■■□□□ 1.18
SSBP3-216ENST00000610401 RAB34Q9BZG1 259 aa22.39■■□□□ 1.18
SSBP3-216ENST00000610401 DOCK2Q92608 1830 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 USH1GQ495M9 461 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 FIGNQ5HY92 759 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 MMS22LQ6ZRQ5 1243 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 MDM1Q8TC05 714 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 CCT8L2Q96SF2 557 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 EMILIN3Q9NT22 766 aa22.39■■□□□ 1.17
SSBP3-216ENST00000610401 ASTE1Q2TB18 679 aaPredicted RBP22.38■■□□□ 1.17
SSBP3-216ENST00000610401 DAGLBQ8NCG7 672 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 RSPH10B2B2RC85 870 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 RSPH10BP0C881 870 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 ZNF211Q13398 564 aaPredicted RBP22.38■■□□□ 1.17
SSBP3-216ENST00000610401 ALS2CLQ60I27 953 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 ZNF571Q7Z3V5 609 aaPredicted RBP22.38■■□□□ 1.17
SSBP3-216ENST00000610401 ZNF473Q8WTR7 871 aaKnown RBP22.38■■□□□ 1.17
SSBP3-216ENST00000610401 HAS1Q92839 578 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 KRIT1O00522 736 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 PPP1R11O60927 126 aaPredicted RBP22.38■■□□□ 1.17
SSBP3-216ENST00000610401 PLA2G4BP0C869 781 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 GALNT17Q6IS24 598 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 ADGRF4Q8IZF3 695 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 IQCKQ8N0W5 287 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 WDR66Q8TBY9 1149 aa22.38■■□□□ 1.17
SSBP3-216ENST00000610401 NOVA2Q9UNW9 492 aaKnown RBP22.38■■□□□ 1.17
SSBP3-216ENST00000610401 CASP4P49662 377 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 CDK17Q00537 523 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 LRRC63Q05C16 580 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 SLC18A3Q16572 532 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 TBC1D10BQ4KMP7 808 aaPredicted RBP22.37■■□□□ 1.17
SSBP3-216ENST00000610401 DAAM2Q86T65 1068 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 U2AF1L4Q8WU68 220 aaKnown RBP22.37■■□□□ 1.17
SSBP3-216ENST00000610401 DNAJC19Q96DA6 116 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 TRIM51Q9BSJ1 452 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 SPZ1Q9BXG8 430 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 CEP72Q9P209 647 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 HNRNPH3P31942 346 aaKnown RBP22.37■■□□□ 1.17
SSBP3-216ENST00000610401 TCP10Q12799 353 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
SSBP3-216ENST00000610401 NAB2Q15742 525 aa22.37■■□□□ 1.17
SSBP3-216ENST00000610401 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
SSBP3-216ENST00000610401 TTI1O43156 1089 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 HSD17B3P37058 310 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 GTF2IP78347 998 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 PRR16Q569H4 304 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 ZNF662Q6ZS27 426 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 SCFD1Q8WVM8 642 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 SART1O43290 800 aaKnown RBP22.36■■□□□ 1.17
SSBP3-216ENST00000610401 PPP1R37O75864 691 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 GFPT2O94808 682 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 RTFDC1Q9BY42 306 aaPredicted RBP22.36■■□□□ 1.17
SSBP3-216ENST00000610401 CCDC113Q9H0I3 377 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 FBXL5Q9UKA1 691 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 AJAP1Q9UKB5 411 aaPredicted RBP22.36■■□□□ 1.17
SSBP3-216ENST00000610401 ATP8A1Q9Y2Q0 1164 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 NR2E1Q9Y466 385 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 TMEM110-MUSTN1A8MSY1 372 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 RFC4P35249 363 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 NLRP14Q86W24 1093 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 CEP57Q86XR8 500 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 ANKS1AQ92625 1134 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 OSGEPQ9NPF4 335 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 HDAC9Q9UKV0 1011 aa22.36■■□□□ 1.17
SSBP3-216ENST00000610401 PHF20L1A8MW92 1017 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 CHMP2AO43633 222 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 SPRED3Q2MJR0 410 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 ALKBH5Q6P6C2 394 aaKnown RBP22.35■■□□□ 1.17
SSBP3-216ENST00000610401 USP38Q8NB14 1042 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 PSTPIP2Q9H939 334 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 MAGEF1Q9HAY2 307 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 PVALEFA0A1B0GWK0 134 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 GCOM1H8Y6P7 765 aaPredicted RBP22.35■■□□□ 1.17
SSBP3-216ENST00000610401 ECM2O94769 699 aaPredicted RBP22.35■■□□□ 1.17
SSBP3-216ENST00000610401 MYZAPP0CAP1 466 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 QPCTQ16769 361 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 GBP6Q6ZN66 633 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 PEX26Q7Z412 305 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 ATP6V1G3Q96LB4 118 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 STK17AQ9UEE5 414 aa22.35■■□□□ 1.17
SSBP3-216ENST00000610401 MYBP10242 640 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 IFFO1Q0D2I5 559 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 MEI1Q5TIA1 1274 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 AADACL2Q6P093 401 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 MAEAQ7L5Y9 396 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms