RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 CCDC84Q86UT8 332 aaPredicted RBP16.87■□□□□ 0.29
RER1-209ENST00000605895 SAAL1Q96ER3 474 aa16.87■□□□□ 0.29
RER1-209ENST00000605895 SAMD15Q9P1V8 674 aa16.87■□□□□ 0.29
RER1-209ENST00000605895 SNX24Q9Y343 169 aa16.87■□□□□ 0.29
RER1-209ENST00000605895 F8VZ95 297 aa16.87■□□□□ 0.29
RER1-209ENST00000605895 DYDC1Q8WWB3 177 aa16.87■□□□□ 0.29
RER1-209ENST00000605895 POTEMA6NI47 508 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 PJA2O43164 708 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 NOL4O94818 638 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 HNRNPH3P31942 346 aaKnown RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 CCDC25Q86WR0 208 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 ECT2Q9H8V3 914 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 DNAJC8O75937 253 aaPredicted RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 GNAT2P19087 354 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 EPS15P42566 896 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 BIRC3Q13489 604 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 AADACL2Q6P093 401 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 TRPM8Q7Z2W7 1104 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 RNF10Q8N5U6 811 aaKnown RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 ANKRD42Q8N9B4 389 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 RUBCNQ92622 972 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 KDM4CQ9H3R0 1056 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 INTS9Q9NV88 658 aaKnown RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 PCDHA4Q9UN74 947 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 RTCBQ9Y3I0 505 aaKnown RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 KRT16P08779 473 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 PTK2Q05397 1052 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 GRIK3Q13003 919 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 FIGNQ5HY92 759 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
RER1-209ENST00000605895 EPS8L3Q8TE67 593 aaKnown RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
RER1-209ENST00000605895 USP17L3A6NCW0 530 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 USP17L4A6NCW7 530 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 IRF6O14896 467 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 LCA5LO95447 670 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 FGGP02679 453 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 CREB1P16220 341 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 LACTB2Q53H82 288 aaPredicted RBP16.85■□□□□ 0.29
RER1-209ENST00000605895 ERMARDQ5T6L9 678 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 EMC10Q5UCC4 262 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 AP1ARQ63HQ0 302 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 USP17L1Q7RTZ2 530 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 PEX26Q7Z412 305 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 FGFR1OP2Q9NVK5 253 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 TSKSQ9UJT2 592 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 ATP6V0A2Q9Y487 856 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 MYH7BA7E2Y1 1941 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 ABCB4P21439 1286 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 FGFR4P22455 802 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 IRX1P78414 480 aaPredicted RBP16.85■□□□□ 0.29
RER1-209ENST00000605895 SPTY2D1Q68D10 685 aaPredicted RBP16.85■□□□□ 0.29
RER1-209ENST00000605895 LRIG3Q6UXM1 1119 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 KLHL29Q96CT2 875 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 DYNLL2Q96FJ2 89 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 FAM129AQ9BZQ8 928 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 DNAJC17Q9NVM6 304 aaKnown RBP16.85■□□□□ 0.29
RER1-209ENST00000605895 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
RER1-209ENST00000605895 CHORDC1Q9UHD1 332 aaPredicted RBP16.85■□□□□ 0.29
RER1-209ENST00000605895 GGA2Q9UJY4 613 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 ATRNO75882 1429 aa16.85■□□□□ 0.29
RER1-209ENST00000605895 SERPING1P05155 500 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 SLC18A3Q16572 532 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 KCNK18Q7Z418 384 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 H0Y3Z8 333 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 PGRMC1O00264 195 aaKnown RBP16.84■□□□□ 0.29
RER1-209ENST00000605895 SLC29A2Q14542 456 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 CENPPQ6IPU0 288 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 SV2BQ7L1I2 683 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 FLT1P17948 1338 aa16.84■□□□□ 0.29
RER1-209ENST00000605895 DDX60Q8IY21 1712 aaKnown RBP16.84■□□□□ 0.29
RER1-209ENST00000605895 C5orf60A6NFR6 353 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 MAP3K13O43283 966 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 SLC9A1P19634 815 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 GJB7Q6PEY0 223 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 ZCRB1Q8TBF4 217 aaKnown RBP16.83■□□□□ 0.29
RER1-209ENST00000605895 FMO2Q99518 471 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 NOP53Q9NZM5 478 aaKnown RBP16.83■□□□□ 0.29
RER1-209ENST00000605895 MYH7P12883 1935 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 PKD1L3Q7Z443 1732 aa16.83■□□□□ 0.29
RER1-209ENST00000605895 LAMB4A4D0S4 1761 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 RGS16O15492 202 aaPredicted RBP16.83■□□□□ 0.28
RER1-209ENST00000605895 KRT13P13646 458 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
RER1-209ENST00000605895 CUL1Q13616 776 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 ASIC2Q16515 512 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 TMED8Q6PL24 325 aaPredicted RBP16.83■□□□□ 0.28
RER1-209ENST00000605895 FAM47EQ6ZV65 393 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 ZNF317Q96PQ6 595 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms