RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 HIBADHP31937 336 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 DLK2Q6UY11 383 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ATCAYQ86WG3 371 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ST13P5Q8NFI4 369 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SNX29Q8TEQ0 813 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SUSD6Q92537 303 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 MFSD3Q96ES6 412 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ASIC4Q96FT7 647 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 FAM89AQ96GI7 184 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 PAWRQ96IZ0 340 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SMAD5Q99717 465 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 PAIP2Q9BPZ3 127 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 THUMPD2Q9BTF0 503 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 LRRC27Q9C0I9 530 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SUV39H2Q9H5I1 410 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 RMI1Q9H9A7 625 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ELP3Q9H9T3 547 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SCUBE2Q9NQ36 999 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SFMBT1Q9UHJ3 866 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SPEF1Q9Y4P9 236 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 EML5Q05BV3 1969 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 PCDH15Q96QU1 1955 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 POTEMA6NI47 508 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 DCDC2CA8MYV0 355 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 GOLGA6L6A8MZA4 724 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ZEB2O60315 1214 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 DUSP11O75319 330 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 RASGRP1O95267 797 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 GUCY1A2P33402 732 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ANP32AP39687 249 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 MLLT6P55198 1093 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 TRIM71Q2Q1W2 868 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 TWISTNBQ3B726 338 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ZKSCAN2Q63HK3 967 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 POTEGQ6S5H5 508 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 CYP26C1Q6V0L0 522 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ZSWIM2Q8NEG5 633 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 GPRC5AQ8NFJ5 357 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 RAET1EQ8TD07 263 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 DIS3LQ8TF46 1054 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 NINJ1Q92982 152 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 XAGE2Q96GT9 111 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SUCLG2Q96I99 432 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SHDQ96IW2 340 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 MSLNLQ96KJ4 702 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 UBE2OQ9C0C9 1292 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ASCC2Q9H1I8 757 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ACTR10Q9NZ32 417 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 FLRT1Q9NZU1 646 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 FNDC3AQ9Y2H6 1198 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 TACC3Q9Y6A5 838 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 PTPRDP23468 1912 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SMAD7O15105 426 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 EPB41L2O43491 1005 aaKnown RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF500O60304 480 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 CD53P19397 219 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 STAT3P40763 770 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 GIPRP48546 466 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 CDKN1CP49918 316 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 LIMK1P53667 647 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 GALNT12Q8IXK2 581 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ETFBKMTQ8IXQ9 262 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 FAM178BQ8IXR5 827 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 TTC30BQ8N4P2 665 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 FAM160A2Q8N612 972 aaPredicted RBP3.39□□□□□ -1.87
VCAM1-205ENST00000603679 ACRBPQ8NEB7 543 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 CXorf38Q8TB03 319 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 NKD1Q969G9 470 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 CENPOQ9BU64 300 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 TTC3P53804 2025 aa3.39□□□□□ -1.87
VCAM1-205ENST00000603679 SERTM1A2A2V5 107 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 HAS3O00219 553 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GRM8O00222 908 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 NKRFO15226 690 aaKnown RBP eCLIP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 PAPSS2O95340 614 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 ALADP13716 330 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CNGA1P29973 690 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 PPM1FP49593 454 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GSTO1P78417 241 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 FPGSQ05932 587 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 DHX9Q08211 1270 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 DDX10Q13206 875 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 RAPGEF1Q13905 1077 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GRIN2CQ14957 1233 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 LRRC41Q15345 812 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 SHHQ15465 462 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 TMEM95Q3KNT9 176 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 NXNQ6DKJ4 435 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 MCTP2Q6DN12 878 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CCDC84Q86UT8 332 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 PI4K2BQ8TCG2 481 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 DNAAF4Q8WXU2 420 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CCDC8Q9H0W5 538 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 RBSNQ9H1K0 784 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 KANSL2Q9H9L4 492 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 SEPT9Q9UHD8 586 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 ZHX1Q9UKY1 873 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 MAPRE3Q9UPY8 281 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms