RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SMCHD1A6NHR9 2005 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 ITIH6Q6UXX5 1313 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
SHKBP1-205ENST00000594973 MED24O75448 989 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 AARSP49588 968 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 LRRC41Q15345 812 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 MOXD1Q6UVY6 613 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 MICALL1Q8N3F8 863 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 ZNF341Q9BYN7 854 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 SEMA6BQ9H3T3 888 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 FAM204AQ9H8W3 233 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 KIF13BQ9NQT8 1826 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 POTEFA5A3E0 1075 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 B4DLN1 442 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 RNF225M0QZC1 329 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 ERLIN2O94905 339 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 ASNSP08243 561 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 POTEIP0CG38 1075 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 UBXN2AP68543 259 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 Q4G0T1 1027 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 POTEGQ6S5H5 508 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 POTEEQ6S8J3 1075 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 SAMD7Q7Z3H4 446 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 CNGA4Q8IV77 575 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 LRRC27Q9C0I9 530 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 SH2D4AQ9H788 454 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 GJA3Q9Y6H8 435 aa18.86■□□□□ 0.61
SHKBP1-205ENST00000594973 ASTN2O75129 1339 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 PLA2G4BP0C869 781 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 RASSF7Q02833 373 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 AFAP1L1Q8TED9 768 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 NOC3LQ8WTT2 800 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 CNOT6LQ96LI5 555 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 TUBGCP2Q9BSJ2 902 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 NPHP3-ACAD11A0A0J9YXS1 232 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 LGALS16A8MUM7 142 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 MSH4O15457 936 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 MYCNP04198 464 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 HYIQ5T013 277 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 MB21D1Q8N884 522 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 DNAJC19Q96DA6 116 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 RANBP17Q9H2T7 1088 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 TBC1D7Q9P0N9 293 aa18.85■□□□□ 0.61
SHKBP1-205ENST00000594973 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 MEIS1O00470 390 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 CCDC175P0C221 793 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 PPP1R2P41236 205 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 TBC1D10BQ4KMP7 808 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 BMP2KQ9NSY1 1161 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 GCOM1H8Y6P7 765 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 NKRFO15226 690 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 POLR2MP0CAP2 368 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 MTIF2P46199 727 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 GMPSP49915 693 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 COASYQ13057 564 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 DGKZQ13574 1117 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 SLC30A10Q6XR72 485 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 GPBP1Q86WP2 473 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 CATSPER3Q86XQ3 398 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 MICALL2Q8IY33 904 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 PANK4Q9NVE7 773 aa18.84■□□□□ 0.61
SHKBP1-205ENST00000594973 PHF20L1A8MW92 1017 aa18.83■□□□□ 0.61
SHKBP1-205ENST00000594973 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.61
SHKBP1-205ENST00000594973 CENPPQ6IPU0 288 aa18.83■□□□□ 0.61
SHKBP1-205ENST00000594973 ABHD10Q9NUJ1 306 aa18.83■□□□□ 0.61
SHKBP1-205ENST00000594973 TBX3O15119 743 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 CIITAP33076 1130 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 CYP4A11Q02928 519 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 TRAF1Q13077 416 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 COBLL1Q53SF7 1204 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 WDR93Q6P2C0 686 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 ZNF507Q8TCN5 953 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 TEPSINQ96N21 525 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 NAA15Q9BXJ9 866 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 A1CFQ9NQ94 594 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 FEM1BQ9UK73 627 aa18.83■□□□□ 0.6
SHKBP1-205ENST00000594973 KIF5CO60282 957 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 SHOX2O60902 331 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 KRT18P05783 430 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 ERCC3P19447 782 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 INPP5BP32019 993 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 KRT9P35527 623 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 ZNF280AP59817 542 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 PSMC6P62333 389 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 MAP3K10Q02779 954 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 EHHADHQ08426 723 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 FAM160B2Q86V87 743 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 FAM114A1Q8IWE2 563 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 GUF1Q8N442 669 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 ERMNQ8TAM6 284 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 FAM20AQ96MK3 541 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 ZSWIM4Q9H7M6 989 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 PUF60Q9UHX1 559 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 SUFUQ9UMX1 484 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms